RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ASLP04424 464 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 STK19P49842 368 aaPredicted RBP16.07■□□□□ 0.16
NME3-211ENST00000568561 RACK1P63244 317 aaKnown RBP16.07■□□□□ 0.16
NME3-211ENST00000568561 STILQ15468 1287 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 DENND1BQ6P3S1 775 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 CHSY1Q86X52 802 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 CIR1Q86X95 450 aaPredicted RBP16.07■□□□□ 0.16
NME3-211ENST00000568561 APCDD1Q8J025 514 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 LGI2Q8N0V4 545 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 AADATQ8N5Z0 425 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 ENGASEQ8NFI3 743 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 SPATA20Q8TB22 786 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 AZIN2Q96A70 460 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 SLC39A13Q96H72 371 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 RPL10LQ96L21 214 aaKnown RBP16.07■□□□□ 0.16
NME3-211ENST00000568561 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 OMDQ99983 421 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
NME3-211ENST00000568561 METTL14Q9HCE5 456 aaKnown RBP16.07■□□□□ 0.16
NME3-211ENST00000568561 AASDHPPTQ9NRN7 309 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 TLR6Q9Y2C9 796 aa16.07■□□□□ 0.16
NME3-211ENST00000568561 MYLKQ15746 1914 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 A0A1B0GTQ1 180 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 PSMA7O14818 248 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 VILLO15195 856 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 RNASEH1O60930 286 aaKnown RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 VAV1P15498 845 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 SLC8A1P32418 973 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 METAP1P53582 386 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 PITX1P78337 314 aaPredicted RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 CAMK2BQ13554 666 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 SOWAHCQ53LP3 525 aaPredicted RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 CCDC117Q8IWD4 279 aaPredicted RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 GALNT15Q8N3T1 639 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 ZNF557Q8N988 423 aaPredicted RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 CRELD1Q96HD1 420 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 LRIG1Q96JA1 1093 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 DDX50Q9BQ39 737 aaKnown RBP16.06■□□□□ 0.16
NME3-211ENST00000568561 MAN1B1Q9UKM7 699 aa16.06■□□□□ 0.16
NME3-211ENST00000568561 BPTFQ12830 3046 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 ASXL3Q9C0F0 2248 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 EDDM13A0A1B0GTR0 161 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 LRRC72A6NJI9 287 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 PLK4O00444 970 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 APOEP02649 317 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 KRT5P13647 590 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 TACR2P21452 398 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 GPD2P43304 727 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 PPP2CBP62714 309 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 PPP2CAP67775 309 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 DNAJC3Q13217 504 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 STIM1Q13586 685 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 SHBQ15464 509 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 SMAD1Q15797 465 aaKnown RBP16.05■□□□□ 0.16
NME3-211ENST00000568561 OR2T34Q8NGX1 318 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 CEP63Q96MT8 703 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 ELF4Q99607 663 aaPredicted RBP16.05■□□□□ 0.16
NME3-211ENST00000568561 ACP6Q9NPH0 428 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 TJP2Q9UDY2 1190 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 CYTH4Q9UIA0 394 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
NME3-211ENST00000568561 ARID1BQ8NFD5 2236 aaPredicted RBP16.04■□□□□ 0.16
NME3-211ENST00000568561 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 SYNJ2BP-COX16A0A087WUM0 186 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 E5RJQ4 531 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 CAPN9O14815 690 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 PMM2O15305 246 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 PAPSS1O43252 624 aaPredicted RBP16.04■□□□□ 0.16
NME3-211ENST00000568561 MOCS3O95396 460 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 PDGFRAP16234 1089 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 ABCB4P21439 1286 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 ADPRHP54922 357 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 GCNT1Q02742 428 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 NNTQ13423 1086 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 TAF5Q15542 800 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 INAVAQ3KP66 663 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
NME3-211ENST00000568561 TTI2Q6NXR4 508 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 OR14C36Q8NHC7 312 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 NELFBQ8WX92 580 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 DHTKD1Q96HY7 919 aaPredicted RBP16.04■□□□□ 0.16
NME3-211ENST00000568561 BBC3Q96PG8 261 aaPredicted RBP16.04■□□□□ 0.16
NME3-211ENST00000568561 INTS2Q9H0H0 1204 aaKnown RBP16.04■□□□□ 0.16
NME3-211ENST00000568561 COX16Q9P0S2 106 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 FZD4Q9ULV1 537 aa16.04■□□□□ 0.16
NME3-211ENST00000568561 A0A1W2PR77 199 aa16.03■□□□□ 0.16
NME3-211ENST00000568561 TARSL2A2RTX5 802 aaKnown RBP16.03■□□□□ 0.16
NME3-211ENST00000568561 ENC1O14682 589 aa16.03■□□□□ 0.16
NME3-211ENST00000568561 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
NME3-211ENST00000568561 LETM1O95202 739 aaPredicted RBP16.03■□□□□ 0.16
NME3-211ENST00000568561 TRUB2O95900 331 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms