RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MYH11P35749 1972 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 MAN1A2O60476 641 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 PRKCBP05771 671 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 UGT1A6P19224 532 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 AOC1P19801 751 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 UGT1A1P22309 533 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 UGT1A4P22310 534 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 UGT1A3P35503 534 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 UGT1A5P35504 534 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 SLC18A2Q05940 514 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 FASTKQ14296 549 aaKnown RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 GALNT18Q6P9A2 607 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 ACOT1Q86TX2 421 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 RELL1Q8IUW5 271 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 LPGAT1Q92604 370 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 RNF157Q96PX1 679 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 OXCT2Q9BYC2 517 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 BARX2Q9UMQ3 279 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 MRASO14807 208 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 GSTA4O15217 222 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 SPTLC1O15269 473 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 HDAC3O15379 428 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 KCNH1O95259 989 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 H6PDO95479 791 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 DLGAP3O95886 979 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 MAPTP10636 758 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 SERPINB1P30740 379 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 LSM12Q3MHD2 195 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 CCDC80Q76M96 950 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 PODNQ7Z5L7 613 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 CBR4Q8N4T8 237 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 OR52K1Q8NGK4 314 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 SYTL5Q8TDW5 730 aaPredicted RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 PRICKLE1Q96MT3 831 aaPredicted RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 RTKNQ9BST9 563 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 SNX15Q9NRS6 342 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 PNPLA3Q9NST1 481 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 UBDO15205 165 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 RFPL1O75677 317 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 LSM8O95777 96 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 ASNSP08243 561 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 PSMA4P25789 261 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 DCAF6Q58WW2 860 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 ARL13AQ5H913 290 aaPredicted RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 PDZD4Q76G19 769 aaPredicted RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 NSUN6Q8TEA1 469 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 HAPLN3Q96S86 360 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 ZFYVE28Q9HCC9 887 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 PCDHGB4Q9UN71 923 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 PCDHGB5Q9Y5G0 923 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 METTL18O95568 372 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 SLC5A2P31639 672 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 ETV4P43268 484 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 RAD23AP54725 363 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 ZCCHC7Q8N3Z6 543 aaKnown RBP11.13□□□□□ -0.63
PALB2-206ENST00000568219 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 GLMNQ92990 594 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 SLC39A3Q9BRY0 314 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 YIPF2Q9BWQ6 316 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 TRIM15Q9C019 465 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 CDH19Q9H159 772 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 LRRC4Q9HBW1 653 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 FAM198AQ9UFP1 575 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 COQ4Q9Y3A0 265 aa11.13□□□□□ -0.63
PALB2-206ENST00000568219 PAPSS1O43252 624 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 DAB1O75553 588 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 TFEBP19484 476 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 EIF4BP23588 611 aaKnown RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 MRPS5P82675 430 aaKnown RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 DGCR6Q14129 220 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CSHL1Q14406 222 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 MAPRE2Q15555 327 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CYP51A1Q16850 503 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 UGT2A3Q6UWM9 527 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 ERI1Q8IV48 349 aaKnown RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.12□□□□□ -0.63
PALB2-206ENST00000568219 C12orf29Q8N999 325 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 GAB3Q8WWW8 586 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 DACH2Q96NX9 599 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 ACE2Q9BYF1 805 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 ZNF518BQ9C0D4 1074 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CDC14AQ9UNH5 594 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 LRP6O75581 1613 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 A0A1B0GTW7 788 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 TK2O00142 265 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 VILLO15195 856 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CCNE2O96020 404 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CXCL8P10145 99 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 PCNAP12004 261 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms