RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DEFB119Q8N690 84 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ATP6V0D2Q8N8Y2 350 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 KDM1BQ8NB78 822 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 MSANTD4Q8NCY6 345 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CADM4Q8NFZ8 388 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CYB5D2Q8WUJ1 264 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 TTC17Q96AE7 1141 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 TOE1Q96GM8 510 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 LMLNQ96KR4 655 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 NUP58Q9BVL2 599 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 NAA15Q9BXJ9 866 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 STK33Q9BYT3 514 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 PCED1AQ9H1Q7 454 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 PDCL3Q9H2J4 239 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SYNCQ9H7C4 482 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 FAM204AQ9H8W3 233 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CAPN10Q9HC96 672 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CD93Q9NPY3 652 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 DDIT4Q9NX09 232 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 KIAA1522Q9P206 1035 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 SUSD2Q9UGT4 822 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SUN2Q9UH99 717 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 XPO7Q9UIA9 1087 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 SLC6A14Q9UN76 642 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 DAAM1Q9Y4D1 1078 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 FHOD1Q9Y613 1164 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ITIH6Q6UXX5 1313 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CHD5Q8TDI0 1954 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CACNA1EQ15878 2313 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 SYNJ2BP-COX16A0A087WUM0 186 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 EDDM13A0A1B0GTR0 161 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 A0A1B0GVM2 712 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 TARSL2A2RTX5 802 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 TCAF2A6NFQ2 919 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 METTL12A8MUP2 240 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 MEI4A8MW99 385 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 UPK3BL1B0FP48 263 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 UPK3BL2E5RIL1 263 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 M0QYT0 321 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 GRAP2O75791 330 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 KCNK5O95279 499 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 MBD3O95983 291 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 DNTTP04053 509 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 SRPRAP08240 638 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 SYPP08247 313 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 CEACAM1P13688 526 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 CSRP1P21291 193 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 MAPK8P45983 427 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 GABRB2P47870 512 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ATXN3P54252 364 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 OXCT1P55809 520 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ECT2LQ008S8 904 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 MYL5Q02045 173 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 SULT2A1Q06520 285 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 SFSWAPQ12872 951 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 NME3Q13232 169 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 AUHQ13825 339 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 KRT31Q15323 416 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 STX1AQ16623 288 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 HNRNPA1L2Q32P51 320 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 PLEKHG6Q3KR16 790 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 TTC31Q49AM3 519 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 PITRM1Q5JRX3 1037 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 BRMS1LQ5PSV4 323 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 FKBP15Q5T1M5 1219 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ACBD5Q5T8D3 534 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 SH3PXD2AQ5TCZ1 1133 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 DCAF12L1Q5VU92 463 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 TAF3Q5VWG9 929 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 RNF219Q5W0B1 726 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 ZNF776Q68DI1 518 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 PSAPL1Q6NUJ1 521 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 SND1Q7KZF4 910 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLK3-219ENST00000567805 NOP9Q86U38 636 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 ERICH1Q86X53 443 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 CACUL1Q86Y37 369 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 CCAR2Q8N163 923 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ANKRD20A12PQ8NF67 263 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 EPS8L1Q8TE68 723 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 DNASE2BQ8WZ79 361 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 RNF34Q969K3 372 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 NT5C3BQ969T7 300 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 C18orf8Q96DM3 657 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 MYEOVQ96EZ4 313 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 PGAP3Q96FM1 320 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 MYO19Q96H55 970 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 MRGPRX3Q96LB0 322 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 RPRD1AQ96P16 312 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 PPP1R9BQ96SB3 815 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 NPY6RQ99463 290 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 PRMT1Q99873 361 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 GPR174Q9BXC1 333 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ZDHHC5Q9C0B5 715 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 RSPH9Q9H1X1 276 aaPredicted RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 VPS16Q9H269 839 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 GANQ9H2C0 597 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 PRSS16Q9NQE7 514 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms