RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 MYOCOSA0A1B0GUC4 107 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 G3V2L1 256 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 PRKCBP05771 671 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ZFXP17010 805 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 CYP3A5P20815 502 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 YY1P25490 414 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ICAM3P32942 547 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 GP5P40197 560 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 MS4A2Q01362 244 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 GBE1Q04446 702 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 CEACAM7Q14002 265 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 GRTP1Q5TC63 336 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 TSHZ1Q6ZSZ6 1077 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 CHERPQ8IWX8 916 aaKnown RBP16.05■□□□□ 0.16
COMMD4-215ENST00000566843 NAT9Q9BTE0 207 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 PRDM16Q9HAZ2 1276 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 PTPRHQ9HD43 1115 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 MYOZ2Q9NPC6 264 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 ZNF358Q9NW07 568 aa16.05■□□□□ 0.16
COMMD4-215ENST00000566843 WNT10BO00744 389 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 ZNF23P17027 643 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 TCF7P36402 384 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-215ENST00000566843 SERPINB5P36952 375 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 TXNL4AP83876 142 aaKnown RBP16.04■□□□□ 0.16
COMMD4-215ENST00000566843 PPIDQ08752 370 aaKnown RBP16.04■□□□□ 0.16
COMMD4-215ENST00000566843 RFTN1Q14699 578 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-215ENST00000566843 KCNT2Q6UVM3 1135 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 MPZL3Q6UWV2 235 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 MICALL2Q8IY33 904 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
COMMD4-215ENST00000566843 MTMR14Q8NCE2 650 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 SLC7A14Q8TBB6 771 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 PCYT2Q99447 389 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 HAUS8Q9BT25 410 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 SNX15Q9NRS6 342 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 NRBP2Q9NSY0 501 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 PTPRFP10586 1907 aa16.04■□□□□ 0.16
COMMD4-215ENST00000566843 ACOT8O14734 319 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 KRT19P08727 400 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 ME2P23368 584 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 CDK9P50750 372 aaKnown RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 GALK1P51570 392 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 HK2P52789 917 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 SFSWAPQ12872 951 aaKnown RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 CASC4Q6P4E1 433 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 DHRS4L2Q6PKH6 230 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 PAOXQ6QHF9 649 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 LCLAT1Q6UWP7 414 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 SAMD7Q7Z3H4 446 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 AMIGO2Q86SJ2 522 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 BHLHE22Q8NFJ8 381 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 CPNE1Q99829 537 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 VRTNQ9H8Y1 702 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 RSL24D1Q9UHA3 163 aaKnown RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 GTF2IRD1Q9UHL9 959 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 A0A0A0MRY4 1105 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 MATN2O00339 956 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 COQ9O75208 318 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 GRAP2O75791 330 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 IL18RAPO95256 599 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 PFKMP08237 780 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 SETSIPP0DME0 302 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 P4HA1P13674 534 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 ZNF26P17031 533 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 MGAT1P26572 445 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 CRADDP78560 199 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 PPM1LQ5SGD2 360 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 CLEC14AQ86T13 490 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 PLD6Q8N2A8 252 aaKnown RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 CXorf38Q8TB03 319 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 KHSRPQ92945 711 aaKnown RBP eCLIP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 SPATA13Q96N96 652 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 BIRC8Q96P09 236 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 RNF11Q9Y3C5 154 aa16.03■□□□□ 0.16
COMMD4-215ENST00000566843 COL11A1P12107 1806 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-215ENST00000566843 KPNA7A9QM74 516 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 TRIM13O60858 407 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 DGKIO75912 1065 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 GMPRP36959 345 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 OAZ1P54368 228 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 LPIN1Q14693 890 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 IER5Q5VY09 327 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 HEATR6Q6AI08 1181 aaKnown RBP16.02■□□□□ 0.16
COMMD4-215ENST00000566843 DUS1LQ6P1R4 473 aaKnown RBP16.02■□□□□ 0.16
COMMD4-215ENST00000566843 OLFML1Q6UWY5 402 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 HACE1Q8IYU2 909 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 GALNT4Q8N4A0 578 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 DCLK2Q8N568 766 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 TRPC4APQ8TEL6 797 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 PDCD6IPQ8WUM4 868 aaKnown RBP16.02■□□□□ 0.16
COMMD4-215ENST00000566843 RCN3Q96D15 328 aa16.02■□□□□ 0.16
COMMD4-215ENST00000566843 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms