RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KRT87PA6NCN2 255 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 GCOM1H8Y6P7 765 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PER2O15055 1255 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 BCAT2O15382 392 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SYNCRIPO60506 623 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 KERAO60938 352 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 GUCA1CO95843 209 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TUBBP07437 444 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TPM2P07951 284 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ABCB1P08183 1280 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SNRNP70P08621 437 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CHN1P15882 459 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 HLA-DPA1P20036 260 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CD72P21854 359 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 KCNA3P22001 575 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ADORA2AP29274 412 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PRKAR1BP31321 381 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 VIPR1P32241 457 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PBX1P40424 430 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PRKCIP41743 596 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC15A1P46059 708 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 GCLCP48506 637 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 MAPKAPK2P49137 400 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 GZMKP49863 264 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 LIG4P49917 911 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ALDH3A2P51648 485 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 DGKEP52429 567 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TPD52P55327 224 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF3BP55884 814 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 UBASH3AP57075 661 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CLRN1P58418 232 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF4A1P60842 406 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 OLR1P78380 273 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ATP2C1P98194 919 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 IL1RL1Q01638 556 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SLFN5Q08AF3 891 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 FRG1Q14331 258 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SEMA3AQ14563 771 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF4HQ15056 248 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PCOLCEQ15113 449 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM214AQ32MH5 1076 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF628Q5EBL2 1059 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ARHGAP40Q5TG30 622 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ANKS6Q68DC2 871 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 RGS7BPQ6MZT1 257 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TAPT1Q6NXT6 567 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CDC73Q6P1J9 531 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM111BQ6SJ93 734 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM108Q6UXF1 575 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 USP51Q70EK9 711 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 LARP4Q71RC2 724 aaKnown RBP eCLIP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 RRM2BQ7LG56 351 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC9B2Q86UD5 537 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 P3H2Q8IVL5 708 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CCAR2Q8N163 923 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SYNE4Q8N205 404 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 FITM2Q8N6M3 262 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 C10orf53Q8N6V4 93 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PTGR2Q8N8N7 351 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TDRD5Q8NAT2 981 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC16A11Q8NCK7 471 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM116Q8NCL8 245 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TNIP2Q8NFZ5 429 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CADM4Q8NFZ8 388 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 KIF18AQ8NI77 898 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 GSDMBQ8TAX9 411 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SETD6Q8TBK2 473 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 NOC3LQ8WTT2 800 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PRPF31Q8WWY3 499 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 HSPH1Q92598 858 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TAF4BQ92750 862 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 N4BP2L2Q92802 583 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ARHGEF2Q92974 986 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CENPTQ96BT3 561 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 MASTLQ96GX5 879 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF668Q96K58 619 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 FER1L6-AS2Q96M78 137 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SORCS2Q96PQ0 1159 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 TRIB1Q96RU8 372 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 IWS1Q96ST2 819 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 NUDT22Q9BRQ3 303 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 HEMGNQ9BXL5 484 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SMOC2Q9H3U7 446 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 THAP9Q9H5L6 903 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 POLR1BQ9H9Y6 1135 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PFDN4Q9NQP4 134 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SNX15Q9NRS6 342 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 RRP7BPQ9NSQ0 103 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SUCLA2Q9P2R7 463 aaPredicted RBP3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 VPS51Q9UID3 782 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SLCO3A1Q9UIG8 710 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 KLHL20Q9Y2M5 609 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC27A6Q9Y2P4 619 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 VWA7Q9Y334 891 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 CCL27Q9Y4X3 112 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PCDHB2Q9Y5E7 798 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 RAD54BQ9Y620 910 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 ARHGEF11O15085 1522 aa3.53□□□□□ -1.84
HERPUD1-211ENST00000566550 PNPLA7Q6ZV29 1317 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms