RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 TUBGCP2Q9BSJ2 902 aa18■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TMEM121BQ9BXQ6 578 aaPredicted RBP18■□□□□ 0.47
MAP1LC3B-207ENST00000565788 PABPC3Q9H361 631 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-207ENST00000565788 GAREM1Q9H706 876 aa18■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SLC12A6Q9UHW9 1150 aa18■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ITIH6Q6UXX5 1313 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TMEM131Q92545 1883 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 A0A1B0GVT2 93 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 DAB1O75553 588 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FSBPO95073 299 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 PROS1P07225 676 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 PDGFRAP16234 1089 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ABCB4P21439 1286 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ERCC5P28715 1186 aaPredicted RBP17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CCR1P32246 355 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 MATKP42679 507 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ECT2LQ008S8 904 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 KCNMA1Q12791 1236 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SMYD5Q6GMV2 418 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 UNQ6494/PRO21346Q6UXR6 183 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 NAXDQ8IW45 347 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FAM71AQ8IYT1 594 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 BIRC7Q96CA5 298 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 RPL10LQ96L21 214 aaKnown RBP17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 NUP62CLQ9H1M0 184 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SGK2Q9HBY8 427 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SERGEFQ9UGK8 458 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 DACH1Q9UI36 760 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SLCO3A1Q9UIG8 710 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CEP83Q9Y592 693 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FHOD1Q9Y613 1164 aa17.99■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FRYQ5TBA9 3013 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 A0A1W2PP55 124 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 MID1O15344 667 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 RNASEH1O60930 286 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SLC2A3P11169 496 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 MZF1P28698 734 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 GGCXP38435 758 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CSNK1EP49674 416 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 STK19P49842 368 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 IRAK1P51617 712 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SLC6A3Q01959 620 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CENPCQ03188 943 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 NME3Q13232 169 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 RAPGEF1Q13905 1077 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 HNRNPDQ14103 355 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 DRAP1Q14919 205 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CST6Q15828 149 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 OTUD1Q5VV17 481 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 RNF219Q5W0B1 726 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CXorf57Q6NSI4 855 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FBXL22Q6P050 247 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 USP30Q70CQ3 517 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SLC26A9Q7LBE3 791 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 MMAAQ8IVH4 418 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 GANCQ8TET4 914 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 IGSF8Q969P0 613 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SYNCQ9H7C4 482 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TM9SF3Q9HD45 589 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FBXL12Q9NXK8 326 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SCML1Q9UN30 329 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FNDC3AQ9Y2H6 1198 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 PLXNA2O75051 1894 aa17.98■□□□□ 0.47
MAP1LC3B-207ENST00000565788 EDDM13A0A1B0GTR0 161 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 A0A1B0GVM2 712 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TARSL2A2RTX5 802 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TCAF2A6NFQ2 919 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 CER1O95813 267 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 AFF3P51826 1226 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SLC12A1Q13621 1099 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 AUHQ13825 339 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 KCNJ12Q14500 433 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 HLA-BQ31612 363 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 RABGAP1LQ5R372 815 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TTC39BQ5VTQ0 682 aaPredicted RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 IL27RAQ6UWB1 636 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 LAYNQ6UX15 382 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 STK40Q8N2I9 435 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ZNF397Q8NF99 534 aaPredicted RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 PTPRN2Q92932 1015 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 RPRD1AQ96P16 312 aaPredicted RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ORAI3Q9BRQ5 295 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 OSGEPQ9NPF4 335 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TM7SF3Q9NS93 570 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 SAMSN1Q9NSI8 373 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 KLK13Q9UKR3 277 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 VANGL2Q9ULK5 521 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 HS3ST4Q9Y661 456 aa17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 TP53BP1Q12888 1972 aaPredicted RBP17.97■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FAM170AA1A519 330 aa17.96■□□□□ 0.47
MAP1LC3B-207ENST00000565788 FAM47DPA6NHR8 397 aa17.96■□□□□ 0.47
MAP1LC3B-207ENST00000565788 M0QYT0 321 aa17.96■□□□□ 0.47
MAP1LC3B-207ENST00000565788 PES1O00541 588 aaKnown RBP17.96■□□□□ 0.47
MAP1LC3B-207ENST00000565788 IGHV4-34P06331 123 aa17.96■□□□□ 0.47
MAP1LC3B-207ENST00000565788 ZNF883P0CG24 379 aa17.96■□□□□ 0.47
MAP1LC3B-207ENST00000565788 VAV1P15498 845 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms