RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 RSPH9Q9H1X1 276 aaPredicted RBP15.2■□□□□ 0.02
USB1-210ENST00000565151 VPS16Q9H269 839 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 HSD3B7Q9H2F3 369 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 IL21RQ9HBE5 538 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 PIGVQ9NUD9 493 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.2■□□□□ 0.02
USB1-210ENST00000565151 OR51B4Q9Y5P0 310 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 HS3ST4Q9Y661 456 aa15.2■□□□□ 0.02
USB1-210ENST00000565151 ZZEF1O43149 2961 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 SPAARA0A1B0GVQ0 90 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 ADCY5O95622 1261 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 APOEP02649 317 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 ATP5BP06576 529 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 MMEP08473 750 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 CEACAM1P13688 526 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 CHRNB2P17787 502 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 OXTRP30559 389 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 KRT9P35527 623 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 DPP6P42658 865 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 GABRB2P47870 512 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 METAP1P53582 386 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 SHC2P98077 582 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 CDK17Q00537 523 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 ZNF252P-AS1Q0IIN9 211 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 GRIK2Q13002 908 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 AUHQ13825 339 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 KRT31Q15323 416 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 HNRNPA1L2Q32P51 320 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 RAB6CQ53S08 254 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 EFHC1Q5JVL4 640 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 XYLT1Q86Y38 959 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 FOXJ1Q92949 421 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 NT5C3BQ969T7 300 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 DDX50Q9BQ39 737 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 RAB6CQ9H0N0 254 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 DNAAF2Q9NVR5 837 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 FANCLQ9NW38 375 aa15.19■□□□□ 0.02
USB1-210ENST00000565151 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
USB1-210ENST00000565151 ITIH6Q6UXX5 1313 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 FREM2Q5SZK8 3169 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 DMXL2Q8TDJ6 3036 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 UPK3BL1B0FP48 263 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 UPK3BL2E5RIL1 263 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 F8VZ95 297 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 M0QYT0 321 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 PAGE1O75459 146 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 CNTN5O94779 1100 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 PDGFRAP16234 1089 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 EEF1GP26641 437 aaKnown RBP15.18■□□□□ 0.02
USB1-210ENST00000565151 NOS2P35228 1153 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 PLK1P53350 603 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 GFPT1Q06210 699 aaPredicted RBP15.18■□□□□ 0.02
USB1-210ENST00000565151 NME3Q13232 169 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 CDH18Q13634 790 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 C5orf22Q49AR2 442 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 KCNT1Q5JUK3 1230 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 SMYD5Q6GMV2 418 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 LAYNQ6UX15 382 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 APTXQ7Z2E3 356 aaKnown RBP15.18■□□□□ 0.02
USB1-210ENST00000565151 BNIPLQ7Z465 357 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 ATP6V0D2Q8N8Y2 350 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 EPS8L1Q8TE68 723 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 FRS2Q8WU20 508 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 BIRC7Q96CA5 298 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 TRIM62Q9BVG3 475 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 MIR1-1HGQ9H1L0 117 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 KIAA1522Q9P206 1035 aaPredicted RBP15.18■□□□□ 0.02
USB1-210ENST00000565151 NOCTQ9UK39 431 aaKnown RBP15.18■□□□□ 0.02
USB1-210ENST00000565151 VANGL2Q9ULK5 521 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 SIK3Q9Y2K2 1263 aa15.18■□□□□ 0.02
USB1-210ENST00000565151 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.18■□□□□ 0.02
USB1-210ENST00000565151 CEP295Q9C0D2 2601 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 A0A1B0GTW7 788 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 MEI4A8MW99 385 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 F5H5T6 163 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 H0Y626 953 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 MID1O15344 667 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 ASLP04424 464 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 IGHV4-34P06331 123 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 ACADMP11310 421 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 CCR1P32246 355 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 FLT3P36888 993 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 MATKP42679 507 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 CXCR3P49682 368 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 JAM2P57087 298 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 RNASE9P60153 205 aaKnown RBP15.17■□□□□ 0.02
USB1-210ENST00000565151 NOMO3P69849 1222 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 ECT2LQ008S8 904 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 NCAPHQ15003 741 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 ALFQ53S48 1182 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 CT47A1Q5JQC4 288 aaPredicted RBP15.17■□□□□ 0.02
USB1-210ENST00000565151 WDR45BQ5MNZ6 344 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 SYCP2LQ5T4T6 812 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 STK40Q8N2I9 435 aa15.17■□□□□ 0.02
USB1-210ENST00000565151 AADATQ8N5Z0 425 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms