RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DEUP1Q05D60 604 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 PPM1JQ5JR12 505 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 PITRM1Q5JRX3 1037 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 KIAA0907Q7Z7F0 614 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 XYLT1Q86Y38 959 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 APCDD1Q8J025 514 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF557Q8N988 423 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 MSANTD4Q8NCY6 345 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 OR2T3Q8NH03 318 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 TOE1Q96GM8 510 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 TBCBQ99426 244 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 NUSAP1Q9BXS6 441 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 SEPT11Q9NVA2 429 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 VANGL2Q9ULK5 521 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 STAP1Q9ULZ2 295 aa14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 NYNRINQ9P2P1 1898 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-204ENST00000565023 PAGE1O75459 146 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 CDH5P33151 784 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 STAT1P42224 750 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 MATKP42679 507 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 TPMTP51580 245 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 NOMO3P69849 1222 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 RABGAP1LQ5R372 815 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 OTUD1Q5VV17 481 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 RNF219Q5W0B1 726 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 FBXL22Q6P050 247 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 C14orf80Q86SX3 495 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 ZDHHC17Q8IUH5 632 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 CCAR2Q8N163 923 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 EMC1Q8N766 993 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF397Q8NF99 534 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 SLC30A5Q8TAD4 765 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 SNX19Q92543 992 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 IGSF8Q969P0 613 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 LMLNQ96KR4 655 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 RPL10LQ96L21 214 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 C11orf70Q9BRQ4 267 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 GTPBP2Q9BX10 602 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 ADAM33Q9BZ11 813 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 TKTL2Q9H0I9 626 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 MIR1-1HGQ9H1L0 117 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 TMEM245Q9H330 911 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 PRSS16Q9NQE7 514 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 ITM2CQ9NQX7 267 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 METTL5Q9NRN9 209 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 TMPRSS4Q9NRS4 437 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 PIGVQ9NUD9 493 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 WSB2Q9NYS7 404 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 KIAA1522Q9P206 1035 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 HS3ST4Q9Y661 456 aa14.07□□□□□ -0.16
VPS9D1-204ENST00000565023 FAM208BQ5VWN6 2430 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 TTC34A8MYJ7 566 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 SIN3BO75182 1162 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 GJB6O95452 261 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 ADCY5O95622 1261 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 LSM8O95777 96 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 ASLP04424 464 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 CHRNB2P17787 502 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 MZF1P28698 734 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 FLT3P36888 993 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 PBX1P40424 430 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 STK19P49842 368 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 UBASH3AP57075 661 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 FMO1Q01740 532 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 CDR2Q01850 454 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 EIF4EBP2Q13542 120 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 CAMK2GQ13555 558 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 AUHQ13825 339 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 PLEKHG6Q3KR16 790 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 RNF214Q8ND24 703 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 GANCQ8TET4 914 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 NPY6RQ99463 290 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 PRMT1Q99873 361 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 WDCPQ9H6R7 721 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 ANLNQ9NQW6 1124 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 USP36Q9P275 1121 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 SUN2Q9UH99 717 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 NOCTQ9UK39 431 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 PILRBQ9UKJ0 227 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 ERVW-1Q9UQF0 538 aa14.06□□□□□ -0.16
VPS9D1-204ENST00000565023 A0A1B0GVM2 712 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 TCAF2A6NFQ2 919 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 DNTTP04053 509 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 ENGP17813 658 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 GABRB2P47870 512 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 LIMK1P53667 647 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 RPS14P62263 151 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 ATP11AP98196 1134 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 CDO1Q16878 200 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 DUOXA1Q1HG43 343 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 SPDYCQ5MJ68 293 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 DCAF12L1Q5VU92 463 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 TRNP1Q6NT89 227 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF677Q86XU0 584 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 OR2I1PQ8NGU4 316 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms