RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SERPINB12Q96P63 405 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 TSGA13Q96PP4 275 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 ZYG11BQ9C0D3 744 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 LRRC4CQ9HCJ2 640 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 EIF2B3Q9NR50 452 aaKnown RBP20.08■□□□□ 0.81
CLN6-205ENST00000564846 IGSF9Q9P2J2 1179 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 TRHDEQ9UKU6 1024 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 VANGL2Q9ULK5 521 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 LZTS1Q9Y250 596 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 ALPK3Q96L96 1907 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 KCNK1O00180 336 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 IVLP07476 585 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 HMBSP08397 361 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 TSHRP16473 764 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 PTPN3P26045 913 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 CA8P35219 290 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 BBS9Q3SYG4 887 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 MSS51Q4VC12 460 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 PID1Q7Z2X4 250 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 TMC7Q7Z402 723 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 LRRC49Q8IUZ0 686 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 ARHGAP12Q8IWW6 846 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 ATP11CQ8NB49 1132 aa20.08■□□□□ 0.8
CLN6-205ENST00000564846 BCCIPQ9P287 314 aaKnown RBP eCLIP20.08■□□□□ 0.8
CLN6-205ENST00000564846 KLHL8Q9P2G9 620 aaPredicted RBP20.08■□□□□ 0.8
CLN6-205ENST00000564846 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.08■□□□□ 0.8
CLN6-205ENST00000564846 CLUHO75153 1309 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 TLDC2A0PJX2 215 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 COCHO43405 550 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 CXCL14O95715 111 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 CCNCP24863 283 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 BMPR1AP36894 532 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 SARNPP82979 210 aaKnown RBP20.07■□□□□ 0.8
CLN6-205ENST00000564846 CCDC38Q502W7 563 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 HP1BP3Q5SSJ5 553 aaPredicted RBP20.07■□□□□ 0.8
CLN6-205ENST00000564846 FAM182AQ5T1J6 154 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 AFMIDQ63HM1 303 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 NLRP14Q86W24 1093 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 STMN4Q9H169 189 aaPredicted RBP20.07■□□□□ 0.8
CLN6-205ENST00000564846 MPP6Q9NZW5 540 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 RWDD3Q9Y3V2 267 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 ASB3Q9Y575 518 aa20.07■□□□□ 0.8
CLN6-205ENST00000564846 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 DRGXA6NNA5 263 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 DFFAO00273 331 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 RGS16O15492 202 aaPredicted RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 TGM5O43548 720 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 ADH1AP07327 375 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 SYN1P17600 705 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 PHBP35232 272 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 LMAN1P49257 510 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 TEX44Q53QW1 395 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 SYCP2LQ5T4T6 812 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 RAP1GAP2Q684P5 730 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 FBXL22Q6P050 247 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 SH2D3CQ8N5H7 860 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 ATPAF2Q8N5M1 289 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 FBXO36Q8NEA4 188 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 EPS8L3Q8TE67 593 aaKnown RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 PLD4Q96BZ4 506 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 PRMT1Q99873 361 aaKnown RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 SLC39A8Q9C0K1 460 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 TMEM248Q9NWD8 314 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 IRAK3Q9Y616 596 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 CTNNB1P35222 781 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 HARS2P49590 506 aaKnown RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 NDST2P52849 883 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 DNAJC21Q5F1R6 531 aaKnown RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 EMC10Q5UCC4 262 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 ITPRIPL1Q6GPH6 555 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 ANKMY2Q8IV38 441 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 PALM2Q8IXS6 379 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 UMODL1-AS1Q8N2C9 162 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 DEPDC1BQ8WUY9 529 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 DPF3Q92784 378 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 LRRC39Q96DD0 335 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 TCF25Q9BQ70 676 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 HTATIP2Q9BUP3 242 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 EMILIN2Q9BXX0 1053 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 CEP41Q9BYV8 373 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 VPS37BQ9H9H4 285 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 XAB2Q9HCS7 855 aaKnown RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 NOVA2Q9UNW9 492 aaKnown RBP20.06■□□□□ 0.8
CLN6-205ENST00000564846 TEX264Q9Y6I9 313 aa20.06■□□□□ 0.8
CLN6-205ENST00000564846 LCHNA4D1U4 455 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 BANF1O75531 89 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 OAS1P00973 400 aaKnown RBP20.05■□□□□ 0.8
CLN6-205ENST00000564846 MLNP12872 115 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 SLC11A2P49281 568 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 KCNQ1P51787 676 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 LONRF1Q17RB8 773 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 PABPC1LQ4VXU2 614 aaKnown RBP20.05■□□□□ 0.8
CLN6-205ENST00000564846 TIGD7Q6NT04 549 aaPredicted RBP20.05■□□□□ 0.8
CLN6-205ENST00000564846 LILRA6Q6PI73 481 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 CCDC149Q6ZUS6 474 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 CAND1Q86VP6 1230 aaKnown RBP20.05■□□□□ 0.8
CLN6-205ENST00000564846 CHSY1Q86X52 802 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 AZIN2Q96A70 460 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 TLCD1Q96CP7 247 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 KLHL5Q96PQ7 755 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms