RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 LTB4R2Q9NPC1 389 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 DONSONQ9NYP3 566 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 CWC15Q9P013 229 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 XPO7Q9UIA9 1087 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 STOML2Q9UJZ1 356 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 MRPS17Q9Y2R5 130 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 SNX10Q9Y5X0 201 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 HELZP42694 1942 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 GOLGA6L7A0A1B0GV03 622 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 SHISA7A6NL88 538 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 C3orf70A6NLC5 250 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-208ENST00000564247 E9PAM4 449 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 FAM72CH0Y354 149 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 MAN2B1O00754 1011 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 ZNF185O15231 689 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 LRIG2O94898 1065 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 FGGP02679 453 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 DCNP07585 359 aaKnown RBP17.46■□□□□ 0.39
CMTM3-208ENST00000564247 ZFXP17010 805 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-208ENST00000564247 GOT1P17174 413 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 CD72P21854 359 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 EPHB2P29323 1055 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 SEMA3BQ13214 749 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 ZNF77Q15935 545 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 TAZQ16635 292 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 LONRF2Q1L5Z9 754 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 RABGAP1LQ5R372 815 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 FAM72AQ5TYM5 149 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 FAM72DQ6L9T8 149 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 AADACL2Q6P093 401 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 Q6ZNB5 142 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 FAM72BQ86X60 149 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 SLC13A5Q86YT5 568 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-208ENST00000564247 RASGEF1CQ8N431 466 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 ACTRT1Q8TDG2 376 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 TSC1Q92574 1164 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 CSPG4P5Q96PW8 444 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 RNF157Q96PX1 679 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 HEMGNQ9BXL5 484 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 VANGL2Q9ULK5 521 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 TTC7AQ9ULT0 858 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-208ENST00000564247 VPS13AQ96RL7 3174 aa17.46■□□□□ 0.39
CMTM3-208ENST00000564247 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 TYW5A2RUC4 315 aaKnown RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 FAM170BA6NMN3 283 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 H0Y858 1186 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 PGRMC1O00264 195 aaKnown RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 APOL1O14791 398 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 FGF10O15520 208 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 GREM1O60565 184 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 KRT10P13645 584 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 IL4RP24394 825 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 CKAP4Q07065 602 aaKnown RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 USP4Q13107 963 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 MMRN1Q13201 1228 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 UBXN2BQ14CS0 331 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 LLGL1Q15334 1064 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 WHAMMP3Q1A5X7 153 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 NADSYN1Q6IA69 706 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 FBXL22Q6P050 247 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 RFX8Q6ZV50 586 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 C14orf80Q86SX3 495 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 CREG2Q8IUH2 290 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 LGI2Q8N0V4 545 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 OTUB2Q96DC9 234 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 MSANTD3Q96H12 275 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 MS4A14Q96JA4 679 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 RPRD1AQ96P16 312 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 PRMT1Q99873 361 aaKnown RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 ZYG11BQ9C0D3 744 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 RETREG1Q9H6L5 497 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 PPARGC1AQ9UBK2 798 aaKnown RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 MTF2Q9Y483 593 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-208ENST00000564247 PIAS3Q9Y6X2 628 aa17.45■□□□□ 0.38
CMTM3-208ENST00000564247 DRGXA6NNA5 263 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 NCAM2O15394 837 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 CST8O60676 142 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 CYBBP04839 570 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 AMPD1P23109 780 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
CMTM3-208ENST00000564247 GGCXP38435 758 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 MAGEA9P43362 315 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 FAM133BQ5BKY9 247 aaKnown RBP17.44■□□□□ 0.38
CMTM3-208ENST00000564247 C1orf228Q6PIY5 440 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 BBS7Q8IWZ6 715 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 CPXM2Q8N436 756 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 PCDH19Q8TAB3 1148 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 CLDN23Q96B33 292 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 FAF2Q96CS3 445 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 TMA16Q96EY4 203 aaKnown RBP17.44■□□□□ 0.38
CMTM3-208ENST00000564247 ZFYVE19Q96K21 471 aa17.44■□□□□ 0.38
CMTM3-208ENST00000564247 C8orf33Q9H7E9 229 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-208ENST00000564247 PIEZO1Q92508 2521 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 MYO15AQ9UKN7 3530 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 SCAMP3O14828 347 aaKnown RBP17.43■□□□□ 0.38
CMTM3-208ENST00000564247 TSPAN3O60637 253 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 RHOQP17081 205 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms