RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 MXRA8Q9BRK3 442 aa9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 B3GNT4Q9C0J1 378 aa9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 NAA50Q9GZZ1 169 aaKnown RBP9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 PNPLA3Q9NST1 481 aa9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 DNMT3BQ9UBC3 853 aaKnown RBP9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 FETUBQ9UGM5 382 aa9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 ATP11BQ9Y2G3 1177 aa9.38□□□□□ -0.91
AC138869.3-201ENST00000563960 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 C1orf232A0A0U1RR37 186 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 TNPO2O14787 897 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CHMP2AO43633 222 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 GMNNO75496 209 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 MT-ND3P03897 115 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 NR3C1P04150 777 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ZSCAN5DPP0CG00 497 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ZNF182P17025 639 aaPredicted RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 PTPN1P18031 435 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CYP2B6P20813 491 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ENPP1P22413 925 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 DCKP27707 260 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 MAPK4P31152 587 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 EIF3EP60228 445 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 SP4Q02446 784 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CDK18Q07002 472 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 MTMR1Q13613 665 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CDHR3Q6ZTQ4 885 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 FRMD7Q6ZUT3 714 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 FRA10AC1Q70Z53 315 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 SLFN12Q8IYM2 578 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CLIP4Q8N3C7 705 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ZNF420Q8TAQ5 688 aaPredicted RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ACDQ96AP0 544 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 FRMD8Q9BZ67 464 aaPredicted RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 IMPG2Q9BZV3 1241 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 HOXD1Q9GZZ0 328 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 PARVGQ9HBI0 331 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 PCDH12Q9NPG4 1184 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 KIAA1257Q9ULG3 409 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 DNM3Q9UQ16 869 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 NFASCO94856 1347 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CCDC195A0A1B0GUA6 201 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CENPBD1B2RD01 187 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 PLOD2O00469 737 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 PDXKO00764 312 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CLIC2O15247 247 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 JRKO75564 520 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ZMPSTE24O75844 475 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 FYNP06241 537 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 RALAP11233 206 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CCND2P30279 289 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 GNL1P36915 607 aaPredicted RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 NR4A2P43354 598 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 DLG4P78352 724 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CTAG1AP78358 180 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 OTUD4Q01804 1114 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 SLC18A2Q05940 514 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 SPIRE1Q08AE8 756 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CCL14Q16627 93 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 FAM182AQ5T1J6 154 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 KRT80Q6KB66 452 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 TMEM26Q6ZUK4 368 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 TRMT1LQ7Z2T5 733 aaKnown RBP9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 HEATR4Q86WZ0 1026 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 GALNT13Q8IUC8 556 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 NPLOC4Q8TAT6 608 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 E2F7Q96AV8 911 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 TMEM79Q9BSE2 394 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ZNF577Q9BSK1 485 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 HACD3Q9P035 362 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 APEX2Q9UBZ4 518 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 SLC8A2Q9UPR5 921 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 SATB2Q9UPW6 733 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 TRAF6Q9Y4K3 522 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 ST14Q9Y5Y6 855 aa9.37□□□□□ -0.91
AC138869.3-201ENST00000563960 LOC100653049A0A140TA62 436 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 SLC16A3O15427 465 aaKnown RBP9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 MSI1O43347 362 aaKnown RBP9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 CALUO43852 315 aaPredicted RBP9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 SNAP91O60641 907 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 TBCAO75347 108 aaKnown RBP9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 MTRF1O75570 445 aaKnown RBP9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 KRT34O76011 436 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 KLHL2O95198 593 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 SPATA31C1P0DKV0 1188 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 ETS1P14921 441 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 GLRA2P23416 452 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 POLR2BP30876 1174 aaKnown RBP9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 FMO5P49326 533 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 MLLT10P55197 1068 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 ATP6V0D1P61421 351 aa9.36□□□□□ -0.91
AC138869.3-201ENST00000563960 CHRNEQ04844 493 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms