RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 FMO1Q01740 532 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 UBXN1Q04323 297 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 SFSWAPQ12872 951 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 NME3Q13232 169 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 AUHQ13825 339 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 WDR45BQ5MNZ6 344 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 TAF3Q5VWG9 929 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 DAB2IPQ5VWQ8 1189 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 NAA35Q5VZE5 725 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 CXorf57Q6NSI4 855 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 SND1Q7KZF4 910 aaKnown RBP eCLIP12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 HSPA12BQ96MM6 686 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 RSPH9Q9H1X1 276 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 WDCPQ9H6R7 721 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 CAPN10Q9HC96 672 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 TMEM9BQ9NQ34 198 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 SLC6A14Q9UN76 642 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 ERVW-1Q9UQF0 538 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 HS3ST4Q9Y661 456 aa12.61□□□□□ -0.39
NSMCE1-204ENST00000563273 MYO18AQ92614 2054 aaKnown RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 PATE3B3GLJ2 98 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 CDX4O14627 284 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 PAGE1O75459 146 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 ENDOD1O94919 500 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 CCDC172P0C7W6 258 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 GNSP15586 552 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 CHRNB2P17787 502 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 SULT1E1P49888 294 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 CDH4P55283 916 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 RPS14P62263 151 aaKnown RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 DEUP1Q05D60 604 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 USP30Q70CQ3 517 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 SLC20A1Q8WUM9 679 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 RPRD1AQ96P16 312 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 HAPLN3Q96S86 360 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 ADAM33Q9BZ11 813 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 CD93Q9NPY3 652 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 MUC22E2RYF6 1773 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-204ENST00000563273 IGLV3-10A0A075B6K4 115 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 SYNJ2BP-COX16A0A087WUM0 186 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 DRGXA6NNA5 263 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 C4orf47A7E2U8 309 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 RNASEH1O60930 286 aaKnown RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ADCY5O95622 1261 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 SYPP08247 313 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 UNGP13051 313 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ENGP17813 658 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 RDXP35241 583 aaKnown RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 FLT3P36888 993 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 NNMTP40261 264 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 CENPCQ03188 943 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 PPM1JQ5JR12 505 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 C9orf64Q5T6V5 341 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 RNF219Q5W0B1 726 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ZNF683Q8IZ20 524 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 APCDD1Q8J025 514 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 IGSF8Q969P0 613 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ERLEC1Q96DZ1 483 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ALG14Q96F25 216 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 PCMTD1Q96MG8 357 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 TBCBQ99426 244 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 GPR174Q9BXC1 333 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ZDHHC5Q9C0B5 715 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 TKTL2Q9H0I9 626 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 RETREG1Q9H6L5 497 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 COX16Q9P0S2 106 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 VANGL2Q9ULK5 521 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 OR51B4Q9Y5P0 310 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 SDK1Q7Z5N4 2213 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
NSMCE1-204ENST00000563273 ATP9BO43861 1147 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 SIN3BO75182 1162 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 DNTTP04053 509 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 ADRB1P08588 477 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 ATP1A3P13637 1013 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 TFE3P19532 575 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 CSRP1P21291 193 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 PTPN9P43378 593 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms