RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 FBXO36Q8NEA4 188 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 KCTD13Q8WZ19 329 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 ARPC5LQ9BPX5 153 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 SCUBE2Q9NQ36 999 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 UBA2Q9UBT2 640 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 FAM153AQ9UHL3 310 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 TTLL13PA6NNM8 815 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 TRDMT1O14717 391 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 CCNHP51946 323 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 MKRN4PQ13434 485 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 CST9Q5W186 159 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 ALLCQ8N6M5 410 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 GIPC2Q8TF65 315 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 NKD2Q969F2 451 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 BTN2A3PQ96KV6 586 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 PTPN18Q99952 460 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 SLC4A5Q9BY07 1137 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 UPF3AQ9H1J1 476 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 ERVK-5Q9HDB9 667 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 APOBEC2Q9Y235 224 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 TLR5O60602 858 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 GLRA3O75311 464 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 YBEYP58557 167 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 DNAJC3Q13217 504 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 PDAP1Q13442 181 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 PCSK7Q16549 785 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 SPANXN3Q5MJ09 141 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 HP1BP3Q5SSJ5 553 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 CCDC126Q96EE4 140 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 VMP1Q96GC9 406 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 TGS1Q96RS0 853 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 POLR1EQ9GZS1 481 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 PCDH18Q9HCL0 1135 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 HACD3Q9P035 362 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 PAPPA2Q9BXP8 1791 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 MYO5AQ9Y4I1 1855 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 HEATR9A2RTY3 570 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 F5H423 210 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 HNRNPCL1O60812 293 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 RNASEH1O60930 286 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 IGSF6O95976 241 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 DDX5P17844 614 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 ITGALP20701 1170 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 PROZP22891 400 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 DAOAP59103 153 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 CLDN10P78369 228 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 CRELD2Q6UXH1 353 aaPredicted RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 SIX5Q8N196 739 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 SDR16C5Q8N3Y7 309 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 LEMD2Q8NC56 503 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 AENQ8WTP8 325 aaKnown RBP7.73□□□□□ -1.17
TCF4-216ENST00000562680 WWP1Q9H0M0 922 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 ANKRD31Q8N7Z5 1873 aa7.73□□□□□ -1.17
TCF4-216ENST00000562680 hCG_2014768A0A024R1R8 64 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 CCDC22O60826 627 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 GJB6O95452 261 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 ABHD2P08910 425 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 PGAM1P18669 254 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 HDCP19113 662 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 GPD2P43304 727 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 LONRF1Q17RB8 773 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 SOWAHAQ2M3V2 549 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 MMEL1Q495T6 779 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 THOC7Q6I9Y2 204 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 C15orf39Q6ZRI6 1047 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 C12orf50Q8NA57 414 aaPredicted RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 JOSD2Q8TAC2 188 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 TFAP2BQ92481 460 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 NTAN1Q96AB6 310 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 FOPNLQ96NB1 174 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 SPOCK3Q9BQ16 436 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 GORASP1Q9BQQ3 440 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 UNC93B1Q9H1C4 597 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 AFF4Q9UHB7 1163 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 VANGL2Q9ULK5 521 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 C2CD4BA6NLJ0 364 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 H2AFYO75367 372 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 L1CAMP32004 1257 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 CDH5P33151 784 aaPredicted RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 RPL21P46778 160 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 VEGFBP49765 207 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 SERPINB8P50452 374 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 DPYSL3Q14195 570 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 LPIN1Q14693 890 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 CES5AQ6NT32 575 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 DRICH1Q6PGQ1 229 aaPredicted RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 TMC3Q7Z5M5 1100 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 DSG4Q86SJ6 1040 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 ANKLE1Q8NAG6 615 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 FBXO22Q8NEZ5 403 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 KCNN1Q92952 543 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 ZBTB18Q99592 522 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 NT5MQ9NPB1 228 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 CHST7Q9NS84 486 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 NDFIP2Q9NV92 336 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 FNIP2Q9P278 1114 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 CDY1Q9Y6F8 540 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 PIRO00625 290 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 LRCH4O75427 683 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms