RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ACOX2Q99424 681 aa10.09□□□□□ -0.79
CLK3-208ENST00000562626 DHX35Q9H5Z1 703 aaKnown RBP10.09□□□□□ -0.79
CLK3-208ENST00000562626 NOL6Q9H6R4 1146 aaKnown RBP10.09□□□□□ -0.79
CLK3-208ENST00000562626 LMAN1LQ9HAT1 526 aa10.09□□□□□ -0.79
CLK3-208ENST00000562626 ABCB8Q9NUT2 735 aa10.09□□□□□ -0.79
CLK3-208ENST00000562626 DEC1Q9P2X7 70 aa10.09□□□□□ -0.79
CLK3-208ENST00000562626 SLC12A6Q9UHW9 1150 aa10.09□□□□□ -0.79
CLK3-208ENST00000562626 CAPN6Q9Y6Q1 641 aa10.09□□□□□ -0.79
CLK3-208ENST00000562626 MYLKQ15746 1914 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 MACROD2A1Z1Q3 448 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 MAN2B1O00754 1011 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 CREB3O43889 395 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 PRPSAP2O60256 369 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 RNF40O75150 1001 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 GOT1P17174 413 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 GLDCP23378 1020 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 IL4RP24394 825 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 MAN1A1P33908 653 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 CSKP41240 450 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 CTSOP43234 321 aaPredicted RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 KIR2DL1P43626 348 aaPredicted RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 NOP2P46087 812 aaKnown RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 ACAP1Q15027 740 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 ARL13BQ3SXY8 428 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 PPP6R3Q5H9R7 873 aaPredicted RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 EFHC2Q5JST6 749 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 EGFLAMQ63HQ2 1017 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 BMP8AQ7Z5Y6 402 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 MFN1Q8IWA4 741 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 FBXL6Q8N531 539 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLK3-208ENST00000562626 LRRC57Q8N9N7 239 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 FIBINQ8TAL6 211 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 TSC1Q92574 1164 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 HSPH1Q92598 858 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 KRT35Q92764 455 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 CLDN23Q96B33 292 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 ERLEC1Q96DZ1 483 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 MSANTD3Q96H12 275 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 SHDQ96IW2 340 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 XPO6Q96QU8 1125 aaKnown RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 PSMB7Q99436 277 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 DDX50Q9BQ39 737 aaKnown RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 KLC2Q9H0B6 622 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 MFSD1Q9H3U5 465 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 PCDH18Q9HCL0 1135 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLK3-208ENST00000562626 ETNK2Q9NVF9 386 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 CWC15Q9P013 229 aaKnown RBP10.08□□□□□ -0.8
CLK3-208ENST00000562626 GGA2Q9UJY4 613 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 PYCARDQ9ULZ3 195 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 OR51B4Q9Y5P0 310 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
CLK3-208ENST00000562626 A0A0D9SEW6 157 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 A0A1B0GVM2 712 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 TCAF2A6NFQ2 919 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 BTNL10A8MVZ5 291 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 WASH3PC4AMC7 463 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 STK25O00506 426 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 CYBBP04839 570 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 APODP05090 189 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 PABPC1P11940 636 aaKnown RBP10.07□□□□□ -0.8
CLK3-208ENST00000562626 TNNT1P13805 278 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 AMPD1P23109 780 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 TIE1P35590 1138 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 GRIA2P42262 883 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 SSR1P43307 286 aaKnown RBP10.07□□□□□ -0.8
CLK3-208ENST00000562626 KRT83P78385 493 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 DPYSQ14117 519 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 DPYSL2Q16555 572 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 PTPRNQ16849 979 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 C2orf27AQ580R0 203 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 DGKKQ5KSL6 1271 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 RABGAP1LQ5R372 815 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 MPP7Q5T2T1 576 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 RWDD4Q6NW29 188 aaKnown RBP10.07□□□□□ -0.8
CLK3-208ENST00000562626 CHST9Q7L1S5 443 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 NPWQ8N729 165 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 OR7D4Q8NG98 312 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 FAM71BQ8TC56 605 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 USP33Q8TEY7 942 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 RAPGEF5Q92565 580 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 TBC1D31Q96DN5 1066 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 MYO19Q96H55 970 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
CLK3-208ENST00000562626 ZYG11BQ9C0D3 744 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 MTG2Q9H4K7 406 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 PPARGC1AQ9UBK2 798 aaKnown RBP10.07□□□□□ -0.8
CLK3-208ENST00000562626 DNAI1Q9UI46 699 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 TBC1D30Q9Y2I9 924 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 PPP2R2CQ9Y2T4 447 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 SIT1Q9Y3P8 196 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 ACTL7AQ9Y615 435 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 ALG6Q9Y672 507 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
CLK3-208ENST00000562626 RALGAPA1Q6GYQ0 2036 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms