RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 METTL23Q86XA0 190 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 HASPINQ8TF76 798 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 BCL7CQ8WUZ0 217 aaPredicted RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 DCAKDQ8WVC6 231 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 MYLIPQ8WY64 445 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 PITPNM3Q9BZ71 974 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 XAB2Q9HCS7 855 aaKnown RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 DTLQ9NZJ0 730 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 DSEQ9UL01 958 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ARL2BPQ9Y2Y0 163 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 RAD54BQ9Y620 910 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 TCRBV9S1A1TA0A576 114 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 AP1G2O75843 785 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 F9P00740 461 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 MT-ND3P03897 115 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ODC1P11926 461 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 GOT1P17174 413 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 TAC1P20366 129 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 IGFBP4P22692 258 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 AMPD1P23109 780 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 DNAJB1P25685 340 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 NRLP54845 237 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 WDR4P57081 412 aaKnown RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SLC10A2Q12908 348 aaPredicted RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 TUSC3Q13454 348 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 PDK1Q15118 436 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 C1QTNF12Q5T7M4 302 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 NCBP2-AS2Q69YL0 99 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 FAM131BQ86XD5 332 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 CCDC110Q8TBZ0 833 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 HTR3CQ8WXA8 447 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 RSPH1Q8WYR4 309 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 NTAN1Q96AB6 310 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 MRRFQ96E11 262 aaKnown RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SAMD11Q96NU1 681 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 WDR83Q9BRX9 315 aaKnown RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 CRTAC1Q9NQ79 661 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ZC3H7BQ9UGR2 993 aaKnown RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 USP3Q9Y6I4 520 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 PPP1R12AO14974 1030 aaPredicted RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 BEST1O76090 585 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 MLNP12872 115 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 RPA3P35244 121 aaPredicted RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 DAOAP59103 153 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SEMA5AQ13591 1074 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 PDK4Q16654 411 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 UPP1Q16831 310 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ARL13BQ3SXY8 428 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 RAB41Q5JT25 222 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 FAM35AQ86V20 835 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SLC26A11Q86WA9 606 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 IGDCC3Q8IVU1 814 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SLC39A11Q8N1S5 342 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 LRRC8CQ8TDW0 803 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 RNF139Q8WU17 664 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 POF1BQ8WVV4 589 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 PGAP3Q96FM1 320 aaPredicted RBP11.94□□□□□ -0.5
PCAT1-202ENST00000561978 SMARCD1Q96GM5 515 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 TMEM169Q96HH4 297 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 IGSF21Q96ID5 467 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 UROC1Q96N76 676 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 OLFM3Q96PB7 478 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ACBD6Q9BR61 282 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 TRIM62Q9BVG3 475 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 KLHL14Q9P2G3 628 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ZNF180Q9UJW8 692 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 STARD13Q9Y3M8 1113 aa11.94□□□□□ -0.5
PCAT1-202ENST00000561978 ATG2AQ2TAZ0 1938 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 A0A0A0MRY4 1105 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 SLC34A2O95436 690 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 RB1P06400 928 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 SCTRP47872 440 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 HCAR3P49019 387 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 GLUD2P49448 558 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 NDUFV1P49821 464 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 CAMK1Q14012 370 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 PAFAH1B3Q15102 231 aaKnown RBP11.93□□□□□ -0.5
PCAT1-202ENST00000561978 TTC39BQ5VTQ0 682 aaPredicted RBP11.93□□□□□ -0.5
PCAT1-202ENST00000561978 CYS1Q717R9 158 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 CAND1Q86VP6 1230 aaKnown RBP11.93□□□□□ -0.5
PCAT1-202ENST00000561978 LRRC6Q86X45 466 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 C3orf58Q8NDZ4 430 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 IRGQQ8WZA9 623 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 PCED1BQ96HM7 432 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 SPATA13Q96N96 652 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 ULBP1Q9BZM6 244 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 BRD8Q9H0E9 1235 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 ARHGEF4Q9NR80 690 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 HAUS2Q9NVX0 235 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 MARCH5Q9NX47 278 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 SPG21Q9NZD8 308 aa11.93□□□□□ -0.5
PCAT1-202ENST00000561978 MYBPHLA2RUH7 354 aa11.92□□□□□ -0.5
PCAT1-202ENST00000561978 NCAM2O15394 837 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms