RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 M0QYV0 167 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 ACSL4O60488 711 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 GLDCP23378 1020 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 NDUFA8P51970 172 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 TBX4P57082 545 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 SLC8A3P57103 927 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 CDH18Q13634 790 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 HNRNPA1L2Q32P51 320 aaKnown RBP12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 RAP1GAP2Q684P5 730 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 PMF1Q6P1K2 205 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 OR2T34Q8NGX1 318 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 ERCC4Q92889 916 aaPredicted RBP12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 ZSWIM1Q9BR11 485 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 SEMA4CQ9C0C4 833 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 OSBPL2Q9H1P3 480 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 FZD3Q9NPG1 666 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 WDR70Q9NW82 654 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 SUN2Q9UH99 717 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 TRAF3IP3Q9Y228 551 aa12.11□□□□□ -0.47
NSMCE1-202ENST00000561960 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 RNF225M0QZC1 329 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 TLR4O00206 839 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 TRIM38O00635 465 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 RNASEH1O60930 286 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 MPOP05164 745 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 PRLRP16471 622 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 GGCXP38435 758 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 NXPH1P58417 271 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 PITX1P78337 314 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 INSM1Q01101 510 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 CUL2Q13617 745 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 LY6DQ14210 128 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 DCAF6Q58WW2 860 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 ARHGAP40Q5TG30 622 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 SPACA3Q8IXA5 215 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 HJURPQ8NCD3 748 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 GOLPH3LQ9H4A5 285 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 ABCC13Q9NSE7 274 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 STOML2Q9UJZ1 356 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 COL27A1Q8IZC6 1860 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-202ENST00000561960 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 TRIM49BA6NDI0 452 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 O00370 1275 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 CASC3O15234 703 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 SIGLEC6O43699 453 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 IGLV3-27P01718 113 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 LTFP02788 710 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 PDGFRAP16234 1089 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 MZF1P28698 734 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 DRD3P35462 400 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 SLC11A2P49281 568 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 IRAK1P51617 712 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 TLE3Q04726 772 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 DPYDQ12882 1025 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 ZNF542PQ5EBM4 170 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 USP30Q70CQ3 517 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 ERICH1Q86X53 443 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 DQX1Q8TE96 717 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 TSC1Q92574 1164 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 GOLGA1Q92805 767 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 TTC17Q96AE7 1141 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 FCRL2Q96LA5 508 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 LGMNQ99538 433 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 UBXN6Q9BZV1 441 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 DNAI2Q9GZS0 605 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 RP1P56715 2156 aa12.09□□□□□ -0.47
NSMCE1-202ENST00000561960 TRPM6Q9BX84 2022 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 PMS2P1A4D2B8 440 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 RNF103O00237 685 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 PAPSS1O43252 624 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 RHOBTB3O94955 611 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 FYNP06241 537 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 SYKP43405 635 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 PMS1P54277 932 aaKnown RBP12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 DAB2P98082 770 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 ECT2LQ008S8 904 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 CENPCQ03188 943 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 KCNH2Q12809 1159 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 TAF1BQ53T94 588 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
NSMCE1-202ENST00000561960 MS4A13Q5J8X5 152 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms