RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRC43Q8N309 656 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 MPP5Q8N3R9 675 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 TTC17Q96AE7 1141 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SPATA17Q96L03 361 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 CEP295NLQ96MC4 621 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 ACTR5Q9H9F9 607 aaPredicted RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 NMUR1Q9HB89 426 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 FGFR1OP2Q9NVK5 253 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 USP15Q9Y4E8 981 aaPredicted RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 VWA8A3KMH1 1905 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 KCNU1A8MYU2 1149 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 TBC1D4O60343 1298 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 CPB1P15086 417 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 CCNCP24863 283 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 DNAJB2P25686 324 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 MGAT1P26572 445 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 YWHAQP27348 245 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 FOXN2P32314 431 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 CCNFP41002 786 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 GRIA1P42261 906 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 NEK3P51956 506 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 GPR17Q13304 367 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 MTA1Q13330 715 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 MTFR1Q15390 333 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 TEX44Q53QW1 395 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 RWDD4Q6NW29 188 aaKnown RBP12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 ANKS3Q6ZW76 656 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 SPATA21Q7Z572 469 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRC49Q8IUZ0 686 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 TP53INP2Q8IXH6 220 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 ATPAF2Q8N5M1 289 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 DEPDC1BQ8WUY9 529 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 CDKL2Q92772 493 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 DPF3Q92784 378 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 SLC39A13Q96H72 371 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 C1orf74Q96LT6 269 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 TEKT5Q96M29 485 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 ELAC2Q9BQ52 826 aaKnown RBP12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 CEP41Q9BYV8 373 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRC40Q9H9A6 602 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 CASS4Q9NQ75 786 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 DONSONQ9NYP3 566 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 MOCS1Q9NZB8 636 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 GMIPQ9P107 970 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
AC055717.2-201ENST00000561864 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 TRIM49D1C9J1S8 452 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 ZBTB24O43167 697 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 LPXNO60711 386 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 GALTP07902 379 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 CSH1P0DML2 217 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 CSH2P0DML3 217 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 GATMP50440 423 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 TBX4P57082 545 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 RPL10AP62906 217 aaKnown RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 DNAJC3Q13217 504 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 CRYMQ14894 314 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 TRIP4Q15650 581 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC1A5Q15758 541 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 DDR2Q16832 855 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 RNF187Q5TA31 235 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 AFMIDQ63HM1 303 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 TIGD7Q6NT04 549 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 LVRNQ6Q4G3 990 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 TIFABQ6ZNK6 161 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 SH2D5Q6ZV89 423 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 ANKRD33Q7Z3H0 272 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 CHSY1Q86X52 802 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 ARHGAP12Q8IWW6 846 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 RTL3Q8N8U3 475 aaKnown RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 NETO2Q8NC67 525 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 LRRC8CQ8TDW0 803 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 FATE1Q969F0 183 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 GPR62Q9BZJ7 368 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 VPS11Q9H270 941 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 SMYD2Q9NRG4 433 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 SFMBT1Q9UHJ3 866 aa12.95□□□□□ -0.34
AC055717.2-201ENST00000561864 STARD13Q9Y3M8 1113 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms