RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TAGLN3Q9UI15 199 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 GJD2Q9UKL4 321 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 FZD10Q9ULW2 581 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 COMMD3-BMI1R4GMX3 469 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 MYO18AQ92614 2054 aaKnown RBP11.25□□□□□ -0.61
NEIL1-202ENST00000561643 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 SPTLC1O15269 473 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 OPHN1O60890 802 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 GLRA3O75311 464 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 CD4P01730 458 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 PGAM1P18669 254 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 KCNA4P22459 653 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 DGKDQ16760 1214 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 STEAP4Q687X5 459 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 PIGZQ86VD9 579 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 P2RY11Q96G91 374 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 MPP4Q96JB8 637 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 ZNF560Q96MR9 790 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 TMPRSS4Q9NRS4 437 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 HSFX1Q9UBD0 423 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 DNAJC16Q9Y2G8 782 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 PLXNA1Q9UIW2 1896 aa11.25□□□□□ -0.61
NEIL1-202ENST00000561643 LYPLA1O75608 230 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CIB2O75838 187 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ALDH1A2O94788 518 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 OR6B1O95007 311 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SNAI1O95863 264 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ALDOAP04075 364 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ITGA2BP08514 1039 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SMPD1P17405 629 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PSMB4P28070 264 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CDK7P50613 346 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SLC25A52Q3SY17 297 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 C6orf163Q5TEZ5 329 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CYS1Q717R9 158 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ACMSDQ8TDX5 336 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 RNF139Q8WU17 664 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 GOLGA2P5Q9HBQ8 144 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CLIC5Q9NZA1 410 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PRR5-ARHGAP8B1AHC4 643 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ASLP04424 464 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PITX1P78337 314 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ARHGAP8P85298 464 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 NIPAL4Q0D2K0 466 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 IFRD2Q12894 506 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 NME3Q13232 169 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PDE1CQ14123 709 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 UBAP2LQ14157 1087 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PDK1Q15118 436 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CES3Q6UWW8 571 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 RASSF3Q86WH2 238 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 NAT14Q8WUY8 206 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 THTPAQ9BU02 230 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SYBUQ9NX95 663 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 IL1RAPL1Q9NZN1 696 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 RCOR3Q9P2K3 495 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 GTF2IRD1Q9UHL9 959 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PSAT1Q9Y617 370 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 ITM2AO43736 263 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 MAGEC1O60732 1142 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 HUS1O60921 280 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 RNASEH1O60930 286 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 TMCC1O94876 653 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SERPINA6P08185 405 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 TKTP29401 623 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 GJA5P36382 358 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 TAF6P49848 677 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CDK18Q07002 472 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 TBCCQ15814 346 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 GSTA3Q16772 222 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 SCUBE1Q8IWY4 988 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CFAP61Q8NHU2 1237 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PIWIL2Q8TC59 973 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 CENPOQ9BU64 300 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 KATNBL1Q9H079 304 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 BRD8Q9H0E9 1235 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
NEIL1-202ENST00000561643 STX18Q9P2W9 335 aaKnown RBP11.24□□□□□ -0.61
NEIL1-202ENST00000561643 E2F8A0AVK6 867 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 RRN3P2A6NIE6 340 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 M0QYT0 321 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 PIRO00625 290 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 XPO1O14980 1071 aaKnown RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 PLIN3O60664 434 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 GPR32O75388 356 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 ERVK-10P10266 1014 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 TYK2P29597 1187 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 CD151P48509 253 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 SLC1A6P48664 564 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 RAP1GDS1P52306 607 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms