RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ASPRV1Q53RT3 343 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 TAF1BQ53T94 588 aaPredicted RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 HSP90AB4PQ58FF6 505 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 TMEM196Q5HYL7 178 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 LIN9Q5TKA1 542 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 SLFN12LQ6IEE8 588 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 USP17L6PQ6QN14 398 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 ABHD15Q6UXT9 468 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 GAREM2Q75VX8 874 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 SYT12Q8IV01 421 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 HDDC3Q8N4P3 179 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 ANKRD53Q8N9V6 530 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 PLA2G15Q8NCC3 412 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 OR2I1PQ8NGU4 316 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 DEPDC1BQ8WUY9 529 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 ERCC4Q92889 916 aaPredicted RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 CLIP3Q96DZ5 547 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 CDHR1Q96JP9 859 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 FAM193BQ96PV7 902 aaPredicted RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 SRPK1Q96SB4 655 aaKnown RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 ORAI3Q9BRQ5 295 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 NUSAP1Q9BXS6 441 aaKnown RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 TRIM4Q9C037 500 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 FBRSL1Q9HCM7 1045 aaKnown RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 GTSE1Q9NYZ3 720 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 SLC9A2Q9UBY0 812 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 TRPS1Q9UHF7 1281 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 MAGEL2Q9UJ55 1249 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 PILRBQ9UKJ0 227 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 PCDHB2Q9Y5E7 798 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 DMRT1Q9Y5R6 373 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 RALGAPA1Q6GYQ0 2036 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 COL1A2P08123 1366 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 UBA6A0AVT1 1052 aaPredicted RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 UBE2QL1A1L167 161 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 CLEC18AA5D8T8 446 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 IPO8O15397 1037 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 CYTH3O43739 400 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 DHX16O60231 1041 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 APBB3O95704 486 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 FGAP02671 866 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 ASLP04424 464 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 CYP17A1P05093 508 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 PARP1P09874 1014 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 PTPN2P17706 415 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 DHPSP49366 369 aaPredicted RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 MAN2A2P49641 1150 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 NANOS3P60323 173 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 TLE3Q04726 772 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 SLC14A1Q13336 389 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 ITGB3BPQ13352 177 aaPredicted RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 DRP2Q13474 957 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 MTMR1Q13613 665 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 ALX1Q15699 326 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 MAPK6Q16659 721 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 KRTAP21-3Q3LHN1 58 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 TTC38Q5R3I4 469 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 HIST2H2BCQ6DN03 193 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 TWF2Q6IBS0 349 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 EFCAB12Q6NXP0 572 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 FUT10Q6P4F1 479 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 CLEC18BQ6UXF7 455 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 RTL10Q7L3V2 364 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 SYT13Q7L8C5 426 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 C11orf74Q86VG3 221 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 CCDC60Q8IWA6 550 aaPredicted RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 LRRC71Q8N4P6 559 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 MINDY1Q8N5J2 469 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 FRMD1Q8N878 549 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 CLEC18CQ8NCF0 446 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 PPP1R14CQ8TAE6 165 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 URGCPQ8TCY9 931 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 CSGALNACT1Q8TDX6 532 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 GCDHQ92947 438 aaPredicted RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 LENG9Q96B70 501 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 PGBD4Q96DM1 585 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 ZFYVE19Q96K21 471 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 RPL10LQ96L21 214 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 FNBP1Q96RU3 617 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 PIGSQ96S52 555 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 COLEC11Q9BWP8 271 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 APOL6Q9BWW8 343 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 GTPBP2Q9BX10 602 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 ENKD1Q9H0I2 346 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 RSAD1Q9HA92 442 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 SAMD15Q9P1V8 674 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 B4GALT6Q9UBX8 382 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 APOBEC2Q9Y235 224 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 RBM8AQ9Y5S9 174 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 CREBBPQ92793 2442 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 PLXNB3Q9ULL4 1909 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 MYH15Q9Y2K3 1946 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 ASCC3Q8N3C0 2202 aaKnown RBP4.17□□□□□ -1.74
HERC1-211ENST00000560983 ITPR3Q14573 2671 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
HERC1-211ENST00000560983 COL5A1P20908 1838 aaPredicted RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 A0A0A6YYJ9 748 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 ARHGEF37A1IGU5 675 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 ARL5CA6NH57 179 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms