RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 FUKQ8N0W3 1084 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.93□□□□□ -0.82
HERC1-210ENST00000560897 ZNF557Q8N988 423 aaPredicted RBP9.93□□□□□ -0.82
HERC1-210ENST00000560897 SLC2A14Q8TDB8 520 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 SSC4DQ8WTU2 575 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 SMOQ99835 787 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 CBWD1Q9BRT8 395 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 FUCA2Q9BTY2 467 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 CALN1Q9BXU9 219 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 EPB41L5Q9HCM4 733 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 CYTH4Q9UIA0 394 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 RP1P56715 2156 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 A1L4Q6 167 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 TARSL2A2RTX5 802 aaKnown RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 VPS37CA5D8V6 355 aaPredicted RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 H3BM21 787 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 TMX2-CTNND1H3BSU7 103 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 NOBOXO60393 691 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 RNGTTO60942 597 aaKnown RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 GABBR2O75899 941 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 BEST1O76090 585 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 IL1BP01584 269 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 ASLP04424 464 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 DLATP10515 647 aaKnown RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 RPIAP49247 311 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 HNRNPKP61978 463 aaKnown RBP eCLIP9.92□□□□□ -0.82
HERC1-210ENST00000560897 NR0B2Q15466 257 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 GUSBP11Q6P575 273 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 PAQR9Q6ZVX9 377 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 RAB11FIP2Q7L804 512 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 ACOT1Q86TX2 421 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 AADATQ8N5Z0 425 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 FAM184AQ8NB25 1140 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 ZMIZ2Q8NF64 920 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 C9orf43Q8TAL5 461 aaPredicted RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 LARP4BQ92615 738 aaKnown RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 RAD54LQ92698 747 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 GLMNQ92990 594 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 NAT6Q93015 286 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 SYAP1Q96A49 352 aaPredicted RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 PLD4Q96BZ4 506 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 TMA16Q96EY4 203 aaKnown RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 DNAJC28Q9NX36 388 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 CLIC5Q9NZA1 410 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 MARCH2Q9P0N8 246 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 TBC1D7Q9P0N9 293 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 ACSL6Q9UKU0 697 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 CEP83Q9Y592 693 aa9.92□□□□□ -0.82
HERC1-210ENST00000560897 RP1L1Q8IWN7 2480 aaPredicted RBP9.92□□□□□ -0.82
HERC1-210ENST00000560897 LY6G6EA0A0G2JKS1 128 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 EDDM13A0A1B0GTR0 161 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 PHACTR2O75167 634 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 VPS4BO75351 444 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 PPP1R37O75864 691 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 NEBLO76041 1014 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 GAP43P17677 238 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 ADORA2BP29275 332 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 ATICP31939 592 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 UGT1A5P35504 534 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
HERC1-210ENST00000560897 KCNA1Q09470 495 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 ALCAMQ13740 583 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 RNF219Q5W0B1 726 aaPredicted RBP9.91□□□□□ -0.82
HERC1-210ENST00000560897 ZNF787Q6DD87 383 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 SCARA5Q6ZMJ2 495 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 GPRIN1Q7Z2K8 1008 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 SKAP1Q86WV1 359 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 CCDC117Q8IWD4 279 aaPredicted RBP9.91□□□□□ -0.82
HERC1-210ENST00000560897 ARHGAP18Q8N392 663 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 ZNF276Q8N554 614 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 FBXO18Q8NFZ0 1043 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 HTR3CQ8WXA8 447 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 MIB2Q96AX9 1013 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 MOCOSQ96EN8 888 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 AK8Q96MA6 479 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 MYOCQ99972 504 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 SMYD3Q9H7B4 428 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 ZNF71Q9NQZ8 489 aaPredicted RBP9.91□□□□□ -0.82
HERC1-210ENST00000560897 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.91□□□□□ -0.82
HERC1-210ENST00000560897 FAM49BQ9NUQ9 324 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 PISDQ9UG56 409 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 VPS4AQ9UN37 437 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 CA5BQ9Y2D0 317 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 U3KQA8 63 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 POLQO75417 2590 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 COL27A1Q8IZC6 1860 aaPredicted RBP9.91□□□□□ -0.82
HERC1-210ENST00000560897 DOCK9Q9BZ29 2069 aa9.91□□□□□ -0.82
HERC1-210ENST00000560897 NYNRINQ9P2P1 1898 aaKnown RBP9.9□□□□□ -0.82
HERC1-210ENST00000560897 TYW5A2RUC4 315 aaKnown RBP9.9□□□□□ -0.82
HERC1-210ENST00000560897 EME2A4GXA9 379 aaPredicted RBP9.9□□□□□ -0.82
HERC1-210ENST00000560897 MUSKO15146 869 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 SLC7A4O43246 635 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 KIF20AO95235 890 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms