RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CCDC14Q49A88 953 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 RABGAP1LQ5R372 815 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 ACAD10Q6JQN1 1059 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SERPINA13PQ6UXR4 307 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SLC36A4Q6YBV0 504 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 PRR23CQ6ZRP0 262 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SND1Q7KZF4 910 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 STRADAQ7RTN6 431 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 TMPRSS6Q8IU80 811 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CARNMT1Q8N4J0 409 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 RXFP2Q8WXD0 754 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF419Q96HQ0 510 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SPACA7Q96KW9 195 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CFAP57Q96MR6 1250 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 C11orf70Q9BRQ4 267 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 PRDM16Q9HAZ2 1276 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 PRSS16Q9NQE7 514 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 VPS45Q9NRW7 570 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF212Q9UDV6 495 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SUN2Q9UH99 717 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SYNJ2BP-COX16A0A087WUM0 186 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 LRRC53A6NM62 1247 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 H0Y626 953 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 ZBTB24O43167 697 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 SYNCRIPO60506 623 aaKnown RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 SERPINC1P01008 464 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 EPHX1P07099 455 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 KRT3P12035 628 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 PDGFRAP16234 1089 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 SDHBP21912 280 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 RDXP35241 583 aaKnown RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 RFC1P35251 1148 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 IRAK1P51617 712 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 LIMK1P53667 647 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 CDH4P55283 916 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 HNRNPA1L2Q32P51 320 aaKnown RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 E4F1Q66K89 784 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 PPP1R2P3Q6NXS1 205 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 WDR59Q6PJI9 974 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 MCOLN2Q8IZK6 566 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 APCDD1Q8J025 514 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 EMC1Q8N766 993 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 SYN2Q92777 582 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 RMDN1Q96DB5 314 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 RPRD1AQ96P16 312 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 PPP1R9BQ96SB3 815 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 NUP58Q9BVL2 599 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 SLC6A17Q9H1V8 727 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 RETREG1Q9H6L5 497 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 WSB2Q9NYS7 404 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 COX16Q9P0S2 106 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 VANGL2Q9ULK5 521 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
SMAD3-213ENST00000560175 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.62□□□□□ -0.23
SMAD3-213ENST00000560175 CACNA1EQ15878 2313 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 TARSL2A2RTX5 802 aaKnown RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 C10orf142B7Z368 130 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 MOCS3O95396 460 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 HLA-EP13747 358 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 MZF1P28698 734 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 ADRA1BP35368 520 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 HOXD12P35452 270 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 MPLP40238 635 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 ID4P47928 161 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 UBASH3AP57075 661 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 TPM4P67936 248 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 ECT2LQ008S8 904 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 ZBTB16Q05516 673 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 SULT2A1Q06520 285 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 SH3PXD2AQ5TCZ1 1133 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 MANEALQ5VSG8 457 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 LPCAT2Q7L5N7 544 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF571Q7Z3V5 609 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 CCDC117Q8IWD4 279 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 SIPA1Q96FS4 1042 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 SIK2Q9H0K1 926 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 OSBPL2Q9H1P3 480 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 HAUS4Q9H6D7 363 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 CD93Q9NPY3 652 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 TMPRSS4Q9NRS4 437 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 PPARGC1AQ9UBK2 798 aaKnown RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 PILRBQ9UKJ0 227 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 USP18Q9UMW8 372 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
SMAD3-213ENST00000560175 NYNRINQ9P2P1 1898 aaKnown RBP13.61□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 TM4SF5O14894 197 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 MAP3K13O43283 966 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 AP5Z1O43299 807 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms