RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HADHAP40939 763 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 GRIA1P42261 906 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 MAGEA12P43365 314 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 GTF2A1P52655 376 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CSE1LP55060 971 aaKnown RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 TMPRSS15P98073 1019 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 NRG1Q02297 640 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 EIF4EBP2Q13542 120 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 BMPR2Q13873 1038 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 PRPSAP1Q14558 356 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 TBCCQ15814 346 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CTC1Q2NKJ3 1217 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 TEX44Q53QW1 395 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 PLEKHG4Q58EX7 1191 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 WASHC2DQ5SRD0 308 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CASC4Q6P4E1 433 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CXCL17Q6UXB2 119 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 C4orf50Q6ZRC1 276 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 FAM43BQ6ZT52 329 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CDHR3Q6ZTQ4 885 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 GPRIN1Q7Z2K8 1008 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 LINC00523Q86TU6 105 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 TMEM135Q86UB9 458 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 NUDCD3Q8IVD9 361 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CCDC117Q8IWD4 279 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 THEM5Q8N1Q8 247 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 LZTR1Q8N653 840 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 RNF169Q8NCN4 708 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 C3orf58Q8NDZ4 430 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 RFWD2Q8NHY2 731 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CERS2Q96G23 380 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 ANKRD27Q96NW4 1050 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 HAPLN3Q96S86 360 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 RTP3Q9BQQ7 232 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 TMEM120AQ9BXJ8 343 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 WWP1Q9H0M0 922 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 WDCPQ9H6R7 721 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 UGT1A7Q9HAW7 530 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 UGT1A10Q9HAW8 530 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 UGT1A8Q9HAW9 530 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 KCNK13Q9HB14 408 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 XPNPEP3Q9NQH7 507 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 SYBUQ9NX95 663 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 ARHGEF38Q9NXL2 777 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 NSMCE4AQ9NXX6 385 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 SEPT10Q9P0V9 454 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 FNIP2Q9P278 1114 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 HEY2Q9UBP5 337 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 SYNJ2BP-COX16A0A087WUM0 186 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CASTOR2A6NHX0 329 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 FAM72CH0Y354 149 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TMEM189-UBE2V1I3L0A0 370 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 IRAK2O43187 625 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CACNG3O60359 315 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 PLIN3O60664 434 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CCDC22O60826 627 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 LMNAP02545 664 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 MPOP05164 745 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SRGAP2BP0DMP2 458 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CALB2P22676 271 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CCNCP24863 283 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 GRK2P25098 689 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 DNAJB1P25685 340 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CD52P31358 61 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TM4SF4P48230 202 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SERPINB8P50452 374 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CDK7P50613 346 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SESN2P58004 480 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TSPY1Q01534 308 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 BST1Q10588 318 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 STX3Q13277 289 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CRHR2Q13324 411 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TRIM71Q2Q1W2 868 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CCDC153Q494R4 210 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TAF1BQ53T94 588 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 MROH9Q5TGP6 573 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 FAM72AQ5TYM5 149 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 MANEALQ5VSG8 457 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 BSPRYQ5W0U4 402 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 OVOS1Q6IE37 1185 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 NAPEPLDQ6IQ20 393 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 FAM72DQ6L9T8 149 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CD300LGQ6UXG3 332 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 MTDHQ86UE4 582 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TAC4Q86UU9 113 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 LCA5Q86VQ0 697 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 RASSF3Q86WH2 238 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 FAM72BQ86X60 149 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CRLF3Q8IUI8 442 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 LRRC49Q8IUZ0 686 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 PCSK9Q8NBP7 692 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 ARMC2Q8NEN0 867 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 KLHDC9Q8NEP7 349 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 DQX1Q8TE96 717 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 RSPH1Q8WYR4 309 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms