RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 CREB3O43889 395 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 ABLIM3O94929 683 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 SMARCB1Q12824 385 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 DPYSQ14117 519 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 TPGS2Q68CL5 300 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 ARHGEF18Q6ZSZ5 1173 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 RFX8Q6ZV50 586 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 Q7L0L9 218 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 SRRM1Q8IYB3 904 aaKnown RBP18.3■□□□□ 0.52
SNX1-208ENST00000559844 LRRC39Q96DD0 335 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 TLE6Q9H808 572 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 DDIT4Q9NX09 232 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 PCDHB5Q9Y5E4 795 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 TGM5O43548 720 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 CLASP2O75122 1294 aaKnown RBP18.3■□□□□ 0.52
SNX1-208ENST00000559844 VNN2O95498 520 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 GLUD1P00367 558 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 SPATA31D3P0C874 917 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 SSTR1P30872 391 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 FDFT1P37268 417 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 ELK3P41970 407 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 NRIP1P48552 1158 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 SPATA31D4Q6ZUB0 917 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 CPLX4Q7Z7G2 160 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 TRABD2AQ86V40 505 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 FBF1Q8TES7 1133 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 DYDC1Q8WWB3 177 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 PRMT1Q99873 361 aaKnown RBP18.3■□□□□ 0.52
SNX1-208ENST00000559844 WDR83Q9BRX9 315 aaKnown RBP18.3■□□□□ 0.52
SNX1-208ENST00000559844 NSUN3Q9H649 340 aaKnown RBP18.3■□□□□ 0.52
SNX1-208ENST00000559844 NKIRAS1Q9NYS0 192 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX1-208ENST00000559844 AFF4Q9UHB7 1163 aaKnown RBP18.3■□□□□ 0.52
SNX1-208ENST00000559844 CHMP2BQ9UQN3 213 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 TEX264Q9Y6I9 313 aa18.3■□□□□ 0.52
SNX1-208ENST00000559844 MFSD11O43934 449 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 IGFBP4P22692 258 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 CLCN4P51793 760 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 ADGRE1Q14246 886 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 PRKD1Q15139 912 aaPredicted RBP18.29■□□□□ 0.52
SNX1-208ENST00000559844 BSPRYQ5W0U4 402 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 GPR153Q6NV75 609 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 TTC9BQ8N6N2 239 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 SPPL2BQ8TCT7 592 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 C2orf15Q8WU43 125 aaKnown RBP18.29■□□□□ 0.52
SNX1-208ENST00000559844 PPP2R3CQ969Q6 453 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 WDCPQ9H6R7 721 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 LMCD1Q9NZU5 365 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
SNX1-208ENST00000559844 A0A0A0MRY4 1105 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 DCLK1O15075 740 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 APRTP07741 180 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 GSTA2P09210 222 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 KRT15P19012 456 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 DRD4P21917 467 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 CXCR3P49682 368 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 TPI1P60174 286 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SARNPP82979 210 aaKnown RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 DUSP4Q13115 394 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SEMA3BQ13214 749 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SEMA5AQ13591 1074 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 FUBP3Q96I24 572 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX1-208ENST00000559844 SPATA13Q96N96 652 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 ZNF317Q96PQ6 595 aaPredicted RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 CYTH2Q99418 400 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 GAS2L1Q99501 681 aaPredicted RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 NSRP1Q9H0G5 558 aaKnown RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 CRISPLD1Q9H336 500 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 TMPRSS4Q9NRS4 437 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 OPHN1O60890 802 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 CREB1P16220 341 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 ELF1P32519 619 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 STX2P32856 288 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SLC18A1P54219 525 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 DUSP6Q16828 381 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 MGAT5BQ3V5L5 792 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 TCEAL5Q5H9L2 206 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 LILRA6Q6PI73 481 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 ADGRD1Q6QNK2 874 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SRLQ86TD4 932 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 ADAM32Q8TC27 787 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 EDEM1Q92611 657 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SGSM3Q96HU1 749 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SMC6Q96SB8 1091 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SEPT5Q99719 369 aaPredicted RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 EPAS1Q99814 870 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 DHRS4Q9BTZ2 278 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 CYP4F11Q9HBI6 524 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 TMEM51Q9NW97 253 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 SMG5Q9UPR3 1016 aaKnown RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 MFHAS1Q9Y4C4 1052 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 MTCH2Q9Y6C9 303 aa18.28■□□□□ 0.52
SNX1-208ENST00000559844 ATXN2Q99700 1313 aaKnown RBP18.28■□□□□ 0.52
SNX1-208ENST00000559844 REV3LO60673 3130 aa18.27■□□□□ 0.52
SNX1-208ENST00000559844 PATJQ8NI35 1801 aa18.27■□□□□ 0.52
SNX1-208ENST00000559844 PRRG1O14668 218 aa18.27■□□□□ 0.52
SNX1-208ENST00000559844 NCAM2O15394 837 aa18.27■□□□□ 0.52
SNX1-208ENST00000559844 SEC24AO95486 1093 aa18.27■□□□□ 0.52
SNX1-208ENST00000559844 METTL18O95568 372 aa18.27■□□□□ 0.52
SNX1-208ENST00000559844 VAV1P15498 845 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms