RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 EDDM13A0A1B0GTR0 161 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 A0A1W2PPC4 97 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 MID1O15344 667 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 RNASEH1O60930 286 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 LUC7L3O95232 432 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 CALCAP01258 141 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 MEA1Q16626 185 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 COL28A1Q2UY09 1125 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 FSCBQ5H9T9 825 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 PITRM1Q5JRX3 1037 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 C9orf64Q5T6V5 341 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 NCEH1Q6PIU2 408 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 FOXR2Q6PJQ5 311 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 C19orf48Q6RUI8 117 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 PDZD3Q86UT5 571 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 OR2T34Q8NGX1 318 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
TPM1-220ENST00000559556 SLC6A18Q96N87 628 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 MIS12Q9H081 205 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 FTSJ1Q9UET6 329 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 ERVW-1Q9UQF0 538 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 RAXQ9Y2V3 346 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 UNC13CQ8NB66 2214 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 ZNF462Q96JM2 2506 aa13.56□□□□□ -0.24
TPM1-220ENST00000559556 A0A1W2PP55 124 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 KCNK3O14649 394 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
TPM1-220ENST00000559556 PPP1R2P41236 205 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 CTSOP43234 321 aaPredicted RBP13.55□□□□□ -0.24
TPM1-220ENST00000559556 GPD2P43304 727 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 CCR5P51681 352 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 C21orf59P57076 290 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 IL9RQ01113 521 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 CETN1Q12798 172 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 KCNJ12Q14500 433 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 DCAF6Q58WW2 860 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 TTI2Q6NXR4 508 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 TAC4Q86UU9 113 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 ARHGEF19Q8IW93 802 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 FAM149B1Q96BN6 582 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 DHTKD1Q96HY7 919 aaPredicted RBP13.55□□□□□ -0.24
TPM1-220ENST00000559556 KREMEN1Q96MU8 473 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 EBF2Q9HAK2 575 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
TPM1-220ENST00000559556 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 NAALADL1Q9UQQ1 740 aa13.55□□□□□ -0.24
TPM1-220ENST00000559556 ARHGEF17Q96PE2 2063 aaPredicted RBP13.55□□□□□ -0.24
TPM1-220ENST00000559556 SCN8AQ9UQD0 1980 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 TRABD2BA6NFA1 517 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 FAM47DPA6NHR8 397 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 TTC34A8MYJ7 566 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 E9PAM4 449 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 RNASEH2AO75792 299 aaKnown RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 MOCS3O95396 460 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 MOCS2O96007 188 aaPredicted RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 ADH1BP00325 375 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 IGLV3-25P01717 112 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 APOEP02649 317 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 WNT1P04628 370 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 CD38P28907 300 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 ACADSBP45954 432 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 ADPRHP54922 357 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 ECT2LQ008S8 904 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 SYPL2Q5VXT5 272 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 MARCH9Q86YJ5 346 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 MMAAQ8IVH4 418 aaKnown RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 CCDC117Q8IWD4 279 aaPredicted RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 CFAP52Q8N1V2 620 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 AADATQ8N5Z0 425 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 ADAM32Q8TC27 787 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 GANCQ8TET4 914 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 STK32AQ8WU08 396 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 BTN2A3PQ96KV6 586 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 FAM129BQ96TA1 746 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 ELF4Q99607 663 aaPredicted RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 OMDQ99983 421 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 NEUROG2Q9H2A3 272 aa13.54□□□□□ -0.24
TPM1-220ENST00000559556 XPO7Q9UIA9 1087 aaKnown RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 TPX2Q9ULW0 747 aaKnown RBP13.54□□□□□ -0.24
TPM1-220ENST00000559556 ZFC3H1O60293 1989 aaKnown RBP13.53□□□□□ -0.24
TPM1-220ENST00000559556 A0A1W2PR77 199 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 GOLGA6L4A6NEF3 574 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 YKT6O15498 198 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 LATO43561 262 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms