RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 IL9RQ01113 521 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 NNTQ13423 1086 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 EXOC3L4Q17RC7 722 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 HNRNPA1L2Q32P51 320 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 TTC31Q49AM3 519 aaPredicted RBP21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 C9orf64Q5T6V5 341 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 KDF1Q8NAX2 398 aaPredicted RBP21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 STK32AQ8WU08 396 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 ZCCHC14Q8WYQ9 949 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 RNF34Q969K3 372 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 NEUROG2Q9H2A3 272 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 PABPC3Q9H361 631 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 KIAA1522Q9P206 1035 aaPredicted RBP21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 PCOLCE2Q9UKZ9 415 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 BTBD3Q9Y2F9 522 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 ANKRD6Q9Y2G4 727 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 MSRB2Q9Y3D2 182 aa21.19■□□□□ 0.98
TSPAN3-206ENST00000559373 PLK4O00444 970 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 IGLV3-25P01717 112 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 PDGFRAP16234 1089 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 PSMD8P48556 350 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 IRAK1P51617 712 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 AFF3P51826 1226 aaKnown RBP21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 ECT2LQ008S8 904 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 CENPCQ03188 943 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 PRAMEF14Q5SWL7 426 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 OR6B2Q6IFH4 312 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 FAM183BPQ6ZVS7 135 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 RAB44Q7Z6P3 723 aaPredicted RBP21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 STK40Q8N2I9 435 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 C1orf131Q8NDD1 294 aaKnown RBP21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 PPP1R13BQ96KQ4 1090 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 BTN2A3PQ96KV6 586 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 SIX2Q9NPC8 291 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 DDIT4Q9NX09 232 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 NCKAP1Q9Y2A7 1128 aa21.18■□□□□ 0.98
TSPAN3-206ENST00000559373 NBEAQ8NFP9 2946 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 KCNU1A8MYU2 1149 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 F5H5T6 163 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 CBFA2T3O75081 653 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 RNASEH2AO75792 299 aaKnown RBP21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 ASLP04424 464 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 ERBB2P04626 1255 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 IGHV4-34P06331 123 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 RDXP35241 583 aaKnown RBP21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 GALCP54803 685 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 UBE2HP62256 183 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 NME3Q13232 169 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 CST6Q15828 149 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 TPD52L1Q16890 204 aaPredicted RBP21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 NCEH1Q6PIU2 408 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 ENOSF1Q7L5Y1 443 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 SLC47A2Q86VL8 602 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 MARCH9Q86YJ5 346 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 CCAR2Q8N163 923 aaKnown RBP21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 ATP6V0D2Q8N8Y2 350 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 RHBDD1Q8TEB9 315 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 SHC3Q92529 594 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 FAM129BQ96TA1 746 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 ORAI3Q9BRQ5 295 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 IRX2Q9BZI1 471 aaPredicted RBP21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 FBRSQ9HAH7 460 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 EBF2Q9HAK2 575 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 DNAJC12Q9UKB3 198 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 ADAMTS20P59510 1910 aa21.17■□□□□ 0.98
TSPAN3-206ENST00000559373 FOXN3O00409 490 aaPredicted RBP21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 MOCS3O95396 460 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 CD27P26842 260 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 SLC8A1P32418 973 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 METAP1P53582 386 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 CDK17Q00537 523 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 ZBTB16Q05516 673 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 ZNF423Q2M1K9 1284 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 CCDC157Q569K6 752 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 RNF219Q5W0B1 726 aaPredicted RBP21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 KIAA0895LQ68EN5 471 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 BEND5Q7L4P6 421 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 ADAT2Q7Z6V5 191 aaKnown RBP21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 AADATQ8N5Z0 425 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 ZNF557Q8N988 423 aaPredicted RBP21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 OR52K2Q8NGK3 314 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 PTPRN2Q92932 1015 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 IGSF8Q969P0 613 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 SLC6A18Q96N87 628 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 PRMT1Q99873 361 aaKnown RBP21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 OMDQ99983 421 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 PCED1AQ9H1Q7 454 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 SGK2Q9HBY8 427 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 VANGL2Q9ULK5 521 aa21.16■□□□□ 0.98
TSPAN3-206ENST00000559373 ARID1BQ8NFD5 2236 aaPredicted RBP21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 WNT9AO14904 365 aa21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 RNASEH1O60930 286 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 SRPRAP08240 638 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 CLCN1P35523 988 aa21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 RNASE9P60153 205 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 EIF4EBP2Q13542 120 aaPredicted RBP21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 HNRNPDQ14103 355 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 TEAD4Q15561 434 aa21.15■□□□□ 0.98
TSPAN3-206ENST00000559373 POM121L1PQ3SYA9 428 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms