RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TOGARAM2Q6ZUX3 1019 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 ERMP1Q7Z2K6 904 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 TMEM110Q86TL2 294 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 WDR5BQ86VZ2 330 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 LONP2Q86WA8 852 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 DENND1CQ8IV53 801 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 CPXM2Q8N436 756 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 TERB1Q8NA31 727 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 IL17RCQ8NAC3 791 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 C1orf131Q8NDD1 294 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 DQX1Q8TE96 717 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 FAM149B1Q96BN6 582 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 CPXM1Q96SM3 734 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 DCLK3Q9C098 648 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 ZDHHC4Q9NPG8 344 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 PLCB1Q9NQ66 1216 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 DNAJC17Q9NVM6 304 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 DEC1Q9P2X7 70 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 LIMA1Q9UHB6 759 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 MMP17Q9ULZ9 603 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 SMG5Q9UPR3 1016 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 ZNF510Q9Y2H8 683 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 SIK3Q9Y2K2 1263 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 LAMA1P25391 3075 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 LGALS16A8MUM7 142 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SGK1O00141 431 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SART1O43290 800 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 KLF8O95600 359 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CISD3P0C7P0 127 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 NCAM1P13591 858 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ATP1A3P13637 1013 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CHKAP35790 457 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TNFRSF4P43489 277 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 PITX1P78337 314 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 MRPS21P82921 87 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TAF5Q15542 800 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 C10orf76Q5T2E6 689 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SYPL2Q5VXT5 272 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 GRAMD4Q6IC98 578 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 NOP9Q86U38 636 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TAC4Q86UU9 113 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CCDC33Q8N5R6 958 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ALLCQ8N6M5 410 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 DDX1Q92499 740 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 FUCA2Q9BTY2 467 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 LHX5Q9H2C1 402 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 FAM207AQ9NSI2 230 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 WDR35Q9P2L0 1181 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 STOML2Q9UJZ1 356 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 FBXO10Q9UK96 956 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CLEC4EQ9ULY5 219 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SLC8A2Q9UPR5 921 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 NAALADL1Q9UQQ1 740 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ABCA7Q8IZY2 2146 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 GON4LQ3T8J9 2241 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CACNA1AO00555 2505 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CCDC163A0A0D9SF12 145 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TBC1D3BA6NDS4 549 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 LRRC10BA6NIK2 292 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 PRRT4C9JH25 899 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 PDE2AO00408 941 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ADAM23O75077 832 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 APBB3O95704 486 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 LATS1O95835 1130 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 GHRHP01286 108 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ERBB2P04626 1255 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CYP11B1P15538 503 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 HOXD9P28356 352 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 KRT9P35527 623 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 HARS2P49590 506 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 DGKGP49619 791 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SGSHP51688 502 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 JAM2P57087 298 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SYCP1Q15431 976 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CRY1Q16526 586 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 LPAL2Q16609 132 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 FAM133BQ5BKY9 247 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TAF3Q5VWG9 929 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 EGFLAMQ63HQ2 1017 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 OLFML1Q6UWY5 402 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 FAM183BPQ6ZVS7 135 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 BEND5Q7L4P6 421 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 DHX40Q8IX18 779 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 DCLK2Q8N568 766 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CAMKK1Q8N5S9 505 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TMEM102Q8N9M5 508 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 TXNDC5Q8NBS9 432 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 CCDC26Q8TAB7 109 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 NANOS1Q8WY41 292 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SLC39A13Q96H72 371 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 PPP1R13BQ96KQ4 1090 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 FCRL2Q96LA5 508 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 SLC2A13Q96QE2 648 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 XPO6Q96QU8 1125 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 BPIFA3Q9BQP9 254 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 STK33Q9BYT3 514 aa6.26□□□□□ -1.41
CTDSPL2-204ENST00000558966 POPDC2Q9HBU9 364 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms