RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 FCRL2Q96LA5 508 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-207ENST00000558763 EPAS1Q99814 870 aa13.32□□□□□ -0.28
SMAD3-207ENST00000558763 GORASP1Q9BQQ3 440 aa13.32□□□□□ -0.28
SMAD3-207ENST00000558763 RAD54BQ9Y620 910 aa13.32□□□□□ -0.28
SMAD3-207ENST00000558763 C2orf71A6NGG8 1288 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 E7EVH7 732 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 RNF103O00237 685 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CREB1P16220 341 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SSTR1P30872 391 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ACTN2P35609 894 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 GNGT1P63211 74 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CREMQ03060 361 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 PPIDQ08752 370 aaKnown RBP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 DUSP4Q13115 394 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 LRRC31Q6UY01 552 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 C4orf22Q6V702 233 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 TDRPQ86YL5 185 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 MRPL43Q8N983 215 aaKnown RBP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 MAML1Q92585 1016 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SEPT5Q99719 369 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 FNIP2Q9P278 1114 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 RABGEF1Q9UJ41 708 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 LPXNO60711 386 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CDH16O75309 829 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 APRTP07741 180 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SPATA31D3P0C874 917 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 EPHB2P29323 1055 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CCR1P32246 355 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ELK3P41970 407 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 NRG1Q02297 640 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 AP1B1Q10567 949 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SKIDA1Q1XH10 827 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CCDC38Q502W7 563 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CAPN12Q6ZSI9 719 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SPATA31D4Q6ZUB0 917 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ARHGAP12Q8IWW6 846 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ZNF683Q8IZ20 524 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ZNF567Q8N184 647 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ATP11CQ8NB49 1132 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 PYROXD1Q8WU10 500 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
SMAD3-207ENST00000558763 HDAC11Q96DB2 347 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 SERPINB11Q96P15 392 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 DHRS4Q9BTZ2 278 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 RXFP1Q9HBX9 757 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 CHMP2BQ9UQN3 213 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 IRAK3Q9Y616 596 aa13.31□□□□□ -0.28
SMAD3-207ENST00000558763 ATG2AQ2TAZ0 1938 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 OPHN1O60890 802 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 ADH1AP07327 375 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 PTPN3P26045 913 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 YWHAQP27348 245 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 LSP1P33241 339 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 GRIA1P42261 906 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 PPARDQ03181 441 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 TAF10Q12962 218 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 RAB33AQ14088 237 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 EFTUD2Q15029 972 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMAD3-207ENST00000558763 LRIT3Q3SXY7 679 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 PIK3R6Q5UE93 754 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 C14orf80Q86SX3 495 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 GPR65Q8IYL9 337 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 ZNF461Q8TAF7 563 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 MDM1Q8TC05 714 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 DEPDC1BQ8WUY9 529 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 FBXO32Q969P5 355 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 KLHL5Q96PQ7 755 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 TTLL2Q9BWV7 592 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 FRMD8Q9BZ67 464 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-207ENST00000558763 ACSS3Q9H6R3 686 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 VPS37BQ9H9H4 285 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 CYP4F11Q9HBI6 524 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 TLR6Q9Y2C9 796 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 HS3ST4Q9Y661 456 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 ANAPC1Q9H1A4 1944 aa13.3□□□□□ -0.28
SMAD3-207ENST00000558763 EXOC1LA0A1B0GW35 172 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 A0A1W2PPC1 479 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 KCNK1O00180 336 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ABLIM3O94929 683 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 TBX18O95935 607 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 IVLP07476 585 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 TSHRP16473 764 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 GARSP41250 739 aaKnown RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ZBTB17Q13105 803 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 RASA2Q15283 850 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 PPP1R21Q6ZMI0 780 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ARHGEF18Q6ZSZ5 1173 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms