RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TAF5Q15542 800 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 CST6Q15828 149 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 EFHC1Q5JVL4 640 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 TTC39BQ5VTQ0 682 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 ADAT2Q7Z6V5 191 aaKnown RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 FAM114A1Q8IWE2 563 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 DEFB106AQ8N104 65 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 CHCHD4Q8N4Q1 142 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 C1orf131Q8NDD1 294 aaKnown RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 SETD7Q8WTS6 366 aaKnown RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 BIRC7Q96CA5 298 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 SLC2A13Q96QE2 648 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 TMEM121BQ9BXQ6 578 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 TM9SF3Q9HD45 589 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 TM7SF3Q9NS93 570 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 FBXL12Q9NXK8 326 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 PCDHGC3Q9UN70 934 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 SLCO1B1Q9Y6L6 691 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 FRYQ5TBA9 3013 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 A0A1B0GVM2 712 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 TARSL2A2RTX5 802 aaKnown RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 TCAF2A6NFQ2 919 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 GRAP2O75791 330 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 RNASEH2AO75792 299 aaKnown RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 FTH1P19P0C7X4 201 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 CD27P26842 260 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 KRT9P35527 623 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 NNMTP40261 264 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 GRIA4P48058 902 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 PSMD8P48556 350 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 OXCT1P55809 520 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 MAN2A1Q16706 1144 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 KIAA0895LQ68EN5 471 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 OR6B2Q6IFH4 312 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 LRSAM1Q6UWE0 723 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 CIR1Q86X95 450 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 IRF2BP1Q8IU81 584 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 MMAAQ8IVH4 418 aaKnown RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 APCDD1Q8J025 514 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 CCAR2Q8N163 923 aaKnown RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 KDF1Q8NAX2 398 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 ZCCHC14Q8WYQ9 949 aaKnown RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 OMDQ99983 421 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 CLSTN2Q9H4D0 955 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 OSGEPQ9NPF4 335 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 DNAJC12Q9UKB3 198 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 PCOLCE2Q9UKZ9 415 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 ZMIZ1Q9ULJ6 1067 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 APOBEC2Q9Y235 224 aaKnown RBP15.11■□□□□ 0.01
SHMT2-235ENST00000557740 MSRB2Q9Y3D2 182 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 ITIH6Q6UXX5 1313 aa15.11■□□□□ 0.01
SHMT2-235ENST00000557740 NUMA1Q14980 2115 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 A0A1W2PP55 124 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 LRRC72A6NJI9 287 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 MID1O15344 667 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 FLRT2O43155 660 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 DAB1O75553 588 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 PRKCSHP14314 528 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 PDGFRAP16234 1089 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 C21orf59P57076 290 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SULT2A1Q06520 285 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 NME3Q13232 169 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 MTA1Q13330 715 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SLC12A1Q13621 1099 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SUZ12Q15022 739 aaKnown RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 KIF19Q2TAC6 998 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 C9orf64Q5T6V5 341 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SMYD5Q6GMV2 418 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 OLFML1Q6UWY5 402 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 LAYNQ6UX15 382 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 FAM183BPQ6ZVS7 135 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 RAB44Q7Z6P3 723 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 WDTC1Q8N5D0 677 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 RPL10LQ96L21 214 aaKnown RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 RPRD1AQ96P16 312 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 PRMT1Q99873 361 aaKnown RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SIX2Q9NPC8 291 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SERGEFQ9UGK8 458 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 DACH1Q9UI36 760 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SLCO3A1Q9UIG8 710 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 AJAP1Q9UKB5 411 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-235ENST00000557740 FZD4Q9ULV1 537 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 ANKRD6Q9Y2G4 727 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 PCDHGB2Q9Y5G2 931 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 SNX11Q9Y5W9 270 aa15.1■□□□□ 0.01
SHMT2-235ENST00000557740 PES1O00541 588 aaKnown RBP15.09■□□□□ 0.01
SHMT2-235ENST00000557740 CBFA2T3O75081 653 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 ADH1BP00325 375 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 ERBB2P04626 1255 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 SLC8A1P32418 973 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 NUMBP49757 651 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 STK19P49842 368 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-235ENST00000557740 CCT8P50990 548 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 BPIFB4P59827 614 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 CENPCQ03188 943 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 EIF4EBP2Q13542 120 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-235ENST00000557740 RAPGEF1Q13905 1077 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 ELAVL3Q14576 367 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms