RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TNS4Q8IZW8 715 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 AHI1Q8N157 1196 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 OXCT2Q9BYC2 517 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 UBAP1Q9NZ09 502 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 NR2E3Q9Y5X4 410 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 AP4B1Q9Y6B7 739 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 CCDC160A6NGH7 325 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 EGFRP00533 1210 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 TFE3P19532 575 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 YY1P25490 414 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 MLH1P40692 756 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 MAGEA12P43365 314 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 LY6KQ17RY6 165 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 SNX32Q86XE0 403 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 ADCY4Q8NFM4 1077 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 MAPK15Q8TD08 544 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 ISL2Q96A47 359 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 OR52B2Q96RD2 323 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 GTF2IRD1Q9UHL9 959 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 EVPLQ92817 2033 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 RNF103O00237 685 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 NOP56O00567 594 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 TRIM13O60858 407 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 MPOP05164 745 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 PYGLP06737 847 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 EDNRBP24530 442 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 GMPRP36959 345 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 ARL4AP40617 200 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 HSPA13P48723 471 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 NADK2Q4G0N4 442 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 EFCAB12Q6NXP0 572 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 KLHDC10Q6PID8 442 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 NAPRTQ6XQN6 538 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 PLPPR4Q7Z2D5 763 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 SETD3Q86TU7 594 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 RP9Q8TA86 221 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 TRAPPC12Q8WVT3 735 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 CENPIQ92674 756 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 PGBD4Q96DM1 585 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 LGMNQ99538 433 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 RBBP8Q99708 897 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 MAGEB5Q9BZ81 275 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 ZNF696Q9H7X3 374 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 DPP3Q9NY33 737 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 ZNF112Q9UJU3 913 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 VPS28Q9UK41 221 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 PACSIN3Q9UKS6 424 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 BTBD19C9JJ37 291 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 G3V2L1 256 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 SLC22A2O15244 555 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 CLCN3P51790 818 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 ATXN1P54253 815 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 MRPS22P82650 360 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 SLC10A6Q3KNW5 377 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 CES3Q6UWW8 571 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 DDI1Q8WTU0 396 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 GPR20Q99678 358 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 FAM49BQ9NUQ9 324 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 RIMS3Q9UJD0 308 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 MID2Q9UJV3 735 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 DMTF1Q9Y222 760 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 MFHAS1Q9Y4C4 1052 aa12.09□□□□□ -0.47
VIPAS39-211ENST00000557658 ARHGAP10A1A4S6 786 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 IQCF3P0C7M6 154 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GOT1P17174 413 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 PSMB4P28070 264 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 PHKA2P46019 1235 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 THOP1P52888 689 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 LIMK2P53671 638 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF280AP59817 542 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF423Q2M1K9 1284 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 STRA8Q7Z7C7 330 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 ACOT1Q86TX2 421 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 METTL25Q8N6Q8 603 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 CCDC185Q8N715 623 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 DLG3Q92796 817 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 C11orf84Q9BUA3 381 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GRIP2Q9C0E4 1043 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 HACL1Q9UJ83 578 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms