RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 HOXD9P28356 352 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CASP14P31944 242 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 FLT3P36888 993 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 WASP42768 502 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 PTPN9P43378 593 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 KIR2DL1P43626 348 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CXCR3P49682 368 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 GSCP56915 257 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ZNF177Q13360 481 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 SLC12A1Q13621 1099 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CRY1Q16526 586 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 FNDC3BQ53EP0 1204 aaKnown RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 FAM133BQ5BKY9 247 aaKnown RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 EMC10Q5UCC4 262 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ANO7Q6IWH7 933 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 SERPINA13PQ6UXR4 307 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 PRR23BQ6ZRT6 265 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CHST9Q7L1S5 443 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 MON1BQ7L1V2 547 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 STRADAQ7RTN6 431 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ZNF571Q7Z3V5 609 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 WDR5BQ86VZ2 330 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 MAML2Q8IZL2 1156 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 EMC1Q8N766 993 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 IL17RCQ8NAC3 791 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 OR8K1Q8NGG5 319 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 FIBINQ8TAL6 211 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ZNF653Q96CK0 615 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 MCEEQ96PE7 176 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 TTYH3Q9C0H2 523 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 PIGVQ9NUD9 493 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ABCB8Q9NUT2 735 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 NCDNQ9UBB6 729 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 KIF26AQ9ULI4 1882 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 COL4A3Q01955 1670 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PRRT4C9JH25 899 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PROB1E7EW31 1015 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SGK1O00141 431 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SRGAP2O75044 1071 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PAGE1O75459 146 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 RPP40O75818 363 aaKnown RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 RNF8O76064 485 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ACADMP11310 421 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 HNRNPLP14866 589 aaKnown RBP eCLIP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PSMA2P25787 234 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SLC6A4P31645 630 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PBX1P40424 430 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PXNP49023 591 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 CDH4P55283 916 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 RPS24P62847 133 aaKnown RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PITX1P78337 314 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 AUHQ13825 339 aaKnown RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SIM2Q14190 667 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ELF2Q15723 593 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 GEN1Q17RS7 908 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 EGFLAMQ63HQ2 1017 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 MBLAC2Q68D91 279 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 NADSYN1Q6IA69 706 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 FBXL22Q6P050 247 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SCYL2Q6P3W7 929 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PKN3Q6P5Z2 889 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 WDR59Q6PJI9 974 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 FAM131BQ86XD5 332 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 VSTM4Q8IW00 320 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 DRC7Q8IY82 874 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 CFAP52Q8N1V2 620 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ZBTB44Q8NCP5 570 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 FAM172AQ8WUF8 416 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 HMGB4Q8WW32 186 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 EZH1Q92800 747 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 NT5C3BQ969T7 300 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 C1orf74Q96LT6 269 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 HAPLN3Q96S86 360 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ARHGEF38Q9NXL2 777 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 DONSONQ9NYP3 566 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 THAP10Q9P2Z0 257 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 CNOT8Q9UFF9 292 aaKnown RBP8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SUN2Q9UH99 717 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 ADAMTS1Q9UHI8 967 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 SLC25A13Q9UJS0 675 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 VANGL2Q9ULK5 521 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 HS3ST4Q9Y661 456 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 STON1Q9Y6Q2 735 aa8.59□□□□□ -1.03
PSEN1-223ENST00000557511 F5P12259 2224 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 C2CD4BA6NLJ0 364 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 AKR1B15C9JRZ8 316 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 K7ESF4 209 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 AKR1B10O60218 316 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 RNASEH1O60930 286 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms