RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ARHGAP42A6NI28 874 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 TREHO43280 583 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 HUS1O60921 280 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 FYNP06241 537 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 CPOXP36551 454 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 CACNA2D1P54289 1103 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 RABGAP1LQ5R372 815 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 ARCQ7LC44 396 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 HIPK4Q8NE63 616 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 CCDC124Q96CT7 223 aaKnown RBP18.16■□□□□ 0.5
XRCC3-218ENST00000557439 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 MAML3Q96JK9 1138 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 RHOBTB2Q9BYZ6 727 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 SNX15Q9NRS6 342 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 TXNDC16Q9P2K2 825 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 RALGAPA2Q2PPJ7 1873 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 YJEFN3A6XGL0 299 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 BTBD19C9JJ37 291 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 XPO1O14980 1071 aaKnown RBP18.16■□□□□ 0.5
XRCC3-218ENST00000557439 MAGEC1O60732 1142 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 OPHN1O60890 802 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 SIN3BO75182 1162 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 ERCC2P18074 760 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 CCR10P46092 362 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 RPL34P49207 117 aaKnown RBP18.16■□□□□ 0.5
XRCC3-218ENST00000557439 IDH3AP50213 366 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 TKTL1P51854 596 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 LRRC36Q1X8D7 754 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 HSP90AA5PQ58FG0 334 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 SMYD5Q6GMV2 418 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 NAPRTQ6XQN6 538 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 CLEC20AQ6ZU45 233 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 PHTF2Q8N3S3 785 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 PHC3Q8NDX5 983 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 HSFY1Q96LI6 401 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 NPY6RQ99463 290 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 ULBP1Q9BZM6 244 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 LRRC4Q9HBW1 653 aa18.16■□□□□ 0.5
XRCC3-218ENST00000557439 CPSF2Q9P2I0 782 aaKnown RBP18.16■□□□□ 0.5
XRCC3-218ENST00000557439 A0A088AWK7 358 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 KIF1CO43896 1103 aaKnown RBP18.15■□□□□ 0.5
XRCC3-218ENST00000557439 NCF2P19878 526 aaPredicted RBP18.15■□□□□ 0.5
XRCC3-218ENST00000557439 SAT1P21673 171 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 ACADSBP45954 432 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 KLC1Q07866 573 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 SNX17Q15036 470 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 GPR142Q7Z601 462 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 STRA8Q7Z7C7 330 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 DNAAF3Q8N9W5 541 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 PYDC1Q8WXC3 89 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 EDEM1Q92611 657 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 DDX50Q9BQ39 737 aaKnown RBP18.15■□□□□ 0.5
XRCC3-218ENST00000557439 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 COPG2Q9UBF2 871 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 DOCK3Q8IZD9 2030 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 ENO4A6NNW6 628 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 HACD1B0YJ81 288 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
XRCC3-218ENST00000557439 STK10O94804 968 aaKnown RBP18.15■□□□□ 0.5
XRCC3-218ENST00000557439 MLNP12872 115 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 ANPEPP15144 967 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 PTPN3P26045 913 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 SIX6OS1Q8N1H7 587 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 ARHGAP24Q8N264 748 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 ANKRD27Q96NW4 1050 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 PPP1R12CQ9BZL4 782 aa18.15■□□□□ 0.5
XRCC3-218ENST00000557439 FAM124BQ9H5Z6 455 aaPredicted RBP18.15■□□□□ 0.5
XRCC3-218ENST00000557439 DAB1O75553 588 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 SERPINE1P05121 402 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 POLBP06746 335 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 RALBP11234 206 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 NPR3P17342 541 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 PTPN1P18031 435 aaKnown RBP18.14■□□□□ 0.49
XRCC3-218ENST00000557439 GLUD2P49448 558 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 CCNA1P78396 465 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 DPYSQ14117 519 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 PDK1Q15118 436 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 ZNF781Q8N8C0 355 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 APBB2Q92870 758 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 UNKQ9C0B0 810 aaKnown RBP18.14■□□□□ 0.49
XRCC3-218ENST00000557439 G3BP2Q9UN86 482 aaKnown RBP18.14■□□□□ 0.49
XRCC3-218ENST00000557439 APOBEC2Q9Y235 224 aaKnown RBP18.14■□□□□ 0.49
XRCC3-218ENST00000557439 IPPQ9Y573 584 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 DCLK1O15075 740 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 CIB2O75838 187 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 NOS2P35228 1153 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 ZBTB17Q13105 803 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 FSTL4Q6MZW2 842 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 SMG8Q8ND04 991 aaKnown RBP18.14■□□□□ 0.49
XRCC3-218ENST00000557439 ATP2A3Q93084 1043 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 CELF6Q96J87 481 aaKnown RBP18.14■□□□□ 0.49
XRCC3-218ENST00000557439 ZNF560Q96MR9 790 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 TINF2Q9BSI4 451 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 CHRAC1Q9NRG0 131 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 GDAP2Q9NXN4 497 aa18.14■□□□□ 0.49
XRCC3-218ENST00000557439 E9PBE3 544 aa18.13■□□□□ 0.49
XRCC3-218ENST00000557439 ZNF195O14628 629 aa18.13■□□□□ 0.49
XRCC3-218ENST00000557439 KLHL41O60662 606 aa18.13■□□□□ 0.49
XRCC3-218ENST00000557439 LTFP02788 710 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms