RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 VILLO15195 856 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 SLC16A3O15427 465 aaKnown RBP14.59□□□□□ -0.07
SLIRP-210ENST00000557431 TLX3O43711 291 aaPredicted RBP14.59□□□□□ -0.07
SLIRP-210ENST00000557431 C7P10643 843 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 SLC8A1P32418 973 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 FMO5P49326 533 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 CDH18Q13634 790 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 MS4A13Q5J8X5 152 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 SYPL2Q5VXT5 272 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 NUGGCQ68CJ6 796 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 RRAGAQ7L523 313 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 UNC45BQ8IWX7 931 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 LGI2Q8N0V4 545 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 SCML4Q8N228 414 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 GOLGA1Q92805 767 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 FAM149B1Q96BN6 582 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 FAM129BQ96TA1 746 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 ELF4Q99607 663 aaPredicted RBP14.59□□□□□ -0.07
SLIRP-210ENST00000557431 SCUBE2Q9NQ36 999 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 ST7Q9NRC1 585 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 DKK4Q9UBT3 224 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 ARMCX3Q9UH62 379 aaPredicted RBP14.59□□□□□ -0.07
SLIRP-210ENST00000557431 CEP83Q9Y592 693 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 A0A1W2PR77 199 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 LDOC1O95751 146 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 ITGAVP06756 1048 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 ABCB4P21439 1286 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 TBXAS1P24557 533 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 CD38P28907 300 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 MAT2AP31153 395 aaKnown RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 FKBP3Q00688 224 aaKnown RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 POM121L1PQ3SYA9 428 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 ZNF658Q5TYW1 1059 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 USP30Q70CQ3 517 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 CHSY1Q86X52 802 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 SCUBE3Q8IX30 993 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 PDCD7Q8N8D1 485 aaKnown RBP14.58□□□□□ -0.08
SLIRP-210ENST00000557431 OR14C36Q8NHC7 312 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 IRGQQ8WZA9 623 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 PTPRN2Q92932 1015 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 NT5C1BQ96P26 610 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 TJP2Q9UDY2 1190 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 CA5BQ9Y2D0 317 aa14.58□□□□□ -0.08
SLIRP-210ENST00000557431 IRAK2O43187 625 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 PAPSS1O43252 624 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 RNASEH1O60930 286 aaKnown RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 SDC3O75056 442 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 ASLP04424 464 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 PAEPP09466 180 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 JUPP14923 745 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 MZF1P28698 734 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 GGCXP38435 758 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 ADPRHP54922 357 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 SEMG2Q02383 582 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 CNGA2Q16280 664 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 ZC3H12AQ5D1E8 599 aaKnown RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 MPP7Q5T2T1 576 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 HES3Q5TGS1 186 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 DENND1BQ6P3S1 775 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 OR2T34Q8NGX1 318 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 LMO3Q8TAP4 145 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 SAP25Q8TEE9 199 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 SLC39A13Q96H72 371 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 SERAC1Q96JX3 654 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 ACP6Q9NPH0 428 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 CYTH4Q9UIA0 394 aa14.57□□□□□ -0.08
SLIRP-210ENST00000557431 COL27A1Q8IZC6 1860 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-210ENST00000557431 RP1P56715 2156 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 SYNJ2BP-COX16A0A087WUM0 186 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 EDDM13A0A1B0GTR0 161 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 TYW5A2RUC4 315 aaKnown RBP14.56□□□□□ -0.08
SLIRP-210ENST00000557431 LRRC72A6NJI9 287 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 RTN2O75298 545 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 RFPL3O75679 317 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 IL1BP01584 269 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 PDGFRAP16234 1089 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 TACR2P21452 398 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 EPHA8P29322 1005 aaPredicted RBP14.56□□□□□ -0.08
SLIRP-210ENST00000557431 DRD3P35462 400 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 ABCG1P45844 678 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 ACADVLP49748 655 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 IRAK1P51617 712 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 CCDC40Q4G0X9 1142 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 KLHL10Q6JEL2 608 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 SPATS2Q86XZ4 545 aaKnown RBP14.56□□□□□ -0.08
SLIRP-210ENST00000557431 FMR1NBQ8N0W7 255 aaPredicted RBP14.56□□□□□ -0.08
SLIRP-210ENST00000557431 KREMEN1Q96MU8 473 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 SERPINB11Q96P15 392 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 MYOCQ99972 504 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 COX16Q9P0S2 106 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 ADAMTS1Q9UHI8 967 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 TLR6Q9Y2C9 796 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 RAI2Q9Y5P3 530 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 ITIH6Q6UXX5 1313 aa14.56□□□□□ -0.08
SLIRP-210ENST00000557431 A0A087WV48 116 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3DA0A087WVF3 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3IA0A087WXS9 549 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms