RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 KCNK3O14649 394 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 IRAK2O43187 625 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 ACSL4O60488 711 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 TBL1XO60907 577 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 FYNP06241 537 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 ATP5BP06576 529 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 TPM2P07951 284 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 LCP1P13796 627 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 CD19P15391 556 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 RPL34P49207 117 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 SUZ12Q15022 739 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 ACAP1Q15027 740 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 CNGA2Q16280 664 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 ZNF776Q68DI1 518 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 C19orf48Q6RUI8 117 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 USP30Q70CQ3 517 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 MARCH9Q86YJ5 346 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 UNC45BQ8IWX7 931 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 FIBINQ8TAL6 211 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 CLEC4CQ8WTT0 213 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 SNX19Q92543 992 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 MRGPRX3Q96LB0 322 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 EBF2Q9HAK2 575 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 SERGEFQ9UGK8 458 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 SUN2Q9UH99 717 aa11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 ANKRD11Q6UB99 2663 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-230ENST00000557201 TMEM131Q92545 1883 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 LGALS16A8MUM7 142 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 TNFSF14O43557 240 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 FSBPO95073 299 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 LTFP02788 710 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 DNTTP04053 509 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 POLR2EP19388 210 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 TBXAS1P24557 533 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 GRK6P43250 576 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 RGS7P49802 495 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 COPB1P53618 953 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 LRMPQ12912 555 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 NNTQ13423 1086 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 TEAD4Q15561 434 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 SMAD1Q15797 465 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 EXOC3L4Q17RC7 722 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 COL28A1Q2UY09 1125 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 HNRNPA1L2Q32P51 320 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 SOWAHCQ53LP3 525 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 C9orf64Q5T6V5 341 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 KIAA0895LQ68EN5 471 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 TMEM270Q6UE05 265 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 PDZD3Q86UT5 571 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 EFCAB3Q8N7B9 438 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 KAT5Q92993 513 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 FCRL2Q96LA5 508 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 HSFY1Q96LI6 401 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 PABPC3Q9H361 631 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 TAB2Q9NYJ8 693 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 KNL1Q8NG31 2342 aa11.11□□□□□ -0.63
HNRNPC-230ENST00000557201 CABIN1Q9Y6J0 2220 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 A0A1B0GTQ1 180 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 A0A1W2PPC4 97 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 PIK3R2O00459 728 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 VILLO15195 856 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 SIN3BO75182 1162 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 WNT1P04628 370 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 PON1P27169 355 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 CSKP41240 450 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 SLC11A2P49281 568 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 CCT8P50990 548 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 GALCP54803 685 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 TBX4P57082 545 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 RACK1P63244 317 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 SHBQ15464 509 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 TTC31Q49AM3 519 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 FSCBQ5H9T9 825 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 TRIM65Q6PJ69 517 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 MFN1Q8IWA4 741 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 GALNT15Q8N3T1 639 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 ZNF557Q8N988 423 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 HJURPQ8NCD3 748 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 DQX1Q8TE96 717 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 FAM129BQ96TA1 746 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 NUCKS1Q9H1E3 243 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 VPS16Q9H269 839 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 SCML1Q9UN30 329 aa11.1□□□□□ -0.63
HNRNPC-230ENST00000557201 PLXNA2O75051 1894 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms