RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 GPR158Q5T848 1215 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 NADSYN1Q6IA69 706 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 GSTA5Q7RTV2 222 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 ZC3H18Q86VM9 953 aaKnown RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 DENND1CQ8IV53 801 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 CDKL3Q8IVW4 592 aaPredicted RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 LZTR1Q8N653 840 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 CCHCR1Q8TD31 782 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 TCEAL4Q96EI5 215 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 TRIM51Q9BSJ1 452 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 TASP1Q9H6P5 420 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 STOML2Q9UJZ1 356 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 MFHAS1Q9Y4C4 1052 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 NUP210Q8TEM1 1887 aaPredicted RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 BCLAF3A2AJT9 711 aaKnown RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 F5H5T6 163 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 H7C0C1 242 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 NCAM2O15394 837 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 MTHFRP42898 656 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 ATP5OP48047 213 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 SLC10A2Q12908 348 aaPredicted RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 TEAD2Q15562 447 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 SLC5A9Q2M3M2 681 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 FAM133BQ5BKY9 247 aaKnown RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 ATAT1Q5SQI0 421 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 STXBP5Q5T5C0 1151 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 FBXL22Q6P050 247 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 DARS2Q6PI48 645 aaKnown RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 DDX42Q86XP3 938 aaKnown RBP eCLIP24.42■■□□□ 1.5
SIX4-203ENST00000556952 RTL3Q8N8U3 475 aaKnown RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 RIPOR3Q96MK2 946 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 TMEM121Q9BTD3 319 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 SLC46A2Q9BY10 475 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 RETREG1Q9H6L5 497 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 EPB41L5Q9HCM4 733 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 LSM7Q9UK45 103 aaKnown RBP24.42■■□□□ 1.5
SIX4-203ENST00000556952 ARHGAP26Q9UNA1 814 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 FAM50BQ9Y247 325 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 NEU2Q9Y3R4 380 aa24.42■■□□□ 1.5
SIX4-203ENST00000556952 DOCK8Q8NF50 2099 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 DRGXA6NNA5 263 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 SGK1O00141 431 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 NRG2O14511 850 aaPredicted RBP24.41■■□□□ 1.5
SIX4-203ENST00000556952 PPP1R12AO14974 1030 aaPredicted RBP24.41■■□□□ 1.5
SIX4-203ENST00000556952 KLKB1P03952 638 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 RHOQP17081 205 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 STIP1P31948 543 aaKnown RBP24.41■■□□□ 1.5
SIX4-203ENST00000556952 VSNL1P62760 191 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 NTHL1P78549 312 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 PDK1Q15118 436 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 C5orf22Q49AR2 442 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 CCDC89Q8N998 374 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 RSAD2Q8WXG1 361 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 NECAB3Q96P71 396 aaPredicted RBP24.41■■□□□ 1.5
SIX4-203ENST00000556952 QKIQ96PU8 341 aaKnown RBP eCLIP24.41■■□□□ 1.5
SIX4-203ENST00000556952 AGO1Q9UL18 857 aaKnown RBP24.41■■□□□ 1.5
SIX4-203ENST00000556952 ZNF510Q9Y2H8 683 aa24.41■■□□□ 1.5
SIX4-203ENST00000556952 ZSCAN5CA6NGD5 496 aaPredicted RBP24.4■■□□□ 1.5
SIX4-203ENST00000556952 MX2P20592 715 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 AVPR1AP37288 418 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 DRG2P55039 364 aaKnown RBP24.4■■□□□ 1.5
SIX4-203ENST00000556952 CUL1Q13616 776 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 SLC45A4Q5BKX6 768 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 ADGRF1Q5T601 910 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 DUPD1Q68J44 220 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 NLRP14Q86W24 1093 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 CMTM8Q8IZV2 173 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 NPWQ8N729 165 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 EIF1ADQ8N9N8 165 aaKnown RBP24.4■■□□□ 1.5
SIX4-203ENST00000556952 ADAMTS19Q8TE59 1207 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 RPRD1AQ96P16 312 aaPredicted RBP24.4■■□□□ 1.5
SIX4-203ENST00000556952 BRD8Q9H0E9 1235 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 PCDH9Q9HC56 1237 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 FAM114A2Q9NRY5 505 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 TMEM248Q9NWD8 314 aa24.4■■□□□ 1.5
SIX4-203ENST00000556952 RABGAP1LQ5R372 815 aa24.39■■□□□ 1.5
SIX4-203ENST00000556952 Q6ZNB5 142 aa24.39■■□□□ 1.5
SIX4-203ENST00000556952 TFB1MQ8WVM0 346 aaKnown RBP24.39■■□□□ 1.5
SIX4-203ENST00000556952 NECTIN4Q96NY8 510 aa24.39■■□□□ 1.5
SIX4-203ENST00000556952 ARGLU1Q9NWB6 273 aaPredicted RBP24.39■■□□□ 1.5
SIX4-203ENST00000556952 MRPS23Q9Y3D9 190 aaKnown RBP24.39■■□□□ 1.5
SIX4-203ENST00000556952 TTC28Q96AY4 2481 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 GREM1O60565 184 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 MAP3K6O95382 1288 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 KRT14P02533 472 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 SP100P23497 879 aaPredicted RBP24.38■■□□□ 1.49
SIX4-203ENST00000556952 SLC6A4P31645 630 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 ZXDBP98169 803 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 BRD3Q15059 726 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 LGI2Q8N0V4 545 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 IGSF8Q969P0 613 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 RTP4Q96DX8 246 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 FERMT1Q9BQL6 677 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 PHF7Q9BWX1 381 aaPredicted RBP24.38■■□□□ 1.49
SIX4-203ENST00000556952 KLC2Q9H0B6 622 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 MPP6Q9NZW5 540 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 ASIC3Q9UHC3 531 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 SH3BP1Q9Y3L3 701 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 NCOR1O75376 2440 aa24.38■■□□□ 1.49
SIX4-203ENST00000556952 GOLGA6L7A0A1B0GV03 622 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms