RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SCYL2Q6P3W7 929 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 RFWD3Q6PCD5 774 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 TXNDC11Q6PKC3 985 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 LGI2Q8N0V4 545 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 FBXL6Q8N531 539 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 FLCNQ8NFG4 579 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 PJA1Q8NG27 643 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 EXD1Q8NHP7 514 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 KCNV2Q8TDN2 545 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 CHFRQ96EP1 664 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 RBM41Q96IZ5 413 aaKnown RBP16.92■□□□□ 0.3
PCNX4-213ENST00000556907 RAB6CQ9H0N0 254 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 DNAJC17Q9NVM6 304 aaKnown RBP16.92■□□□□ 0.3
PCNX4-213ENST00000556907 PPARGC1AQ9UBK2 798 aaKnown RBP16.92■□□□□ 0.3
PCNX4-213ENST00000556907 RNF14Q9UBS8 474 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 XPO7Q9UIA9 1087 aaKnown RBP16.92■□□□□ 0.3
PCNX4-213ENST00000556907 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
PCNX4-213ENST00000556907 IGLV3-10A0A075B6K4 115 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 A0A1B0GVM2 712 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TCAF2A6NFQ2 919 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 DRGXA6NNA5 263 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TSPAN3O60637 253 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TBL1XO60907 577 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 KRT1P04264 644 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 L1CAMP32004 1257 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 CXCR5P32302 372 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 PTPN7P35236 360 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TNFRSF4P43489 277 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 RPS9P46781 194 aaKnown RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 VCPP55072 806 aaKnown RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 UBXN2BQ14CS0 331 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TMEM31Q5JXX7 168 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 ERMARDQ5T6L9 678 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TXNRD3NBQ6F5E7 133 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 GRAMD4Q6IC98 578 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 FBXL22Q6P050 247 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 CHST9Q7L1S5 443 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 ZNF572Q7Z3I7 529 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 CREG2Q8IUH2 290 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 ZNF687Q8N1G0 1237 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 FIBINQ8TAL6 211 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 ACTRT1Q8TDG2 376 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 CLDN23Q96B33 292 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 RPRD1AQ96P16 312 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 SNRNP25Q9BV90 132 aaKnown RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 SIK2Q9H0K1 926 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 DONSONQ9NYP3 566 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 OR12D3Q9UGF7 316 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 TTC7AQ9ULT0 858 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-213ENST00000556907 FZD10Q9ULW2 581 aa16.91■□□□□ 0.3
PCNX4-213ENST00000556907 I6L893 689 aaPredicted RBP16.9■□□□□ 0.3
PCNX4-213ENST00000556907 PGRMC1O00264 195 aaKnown RBP16.9■□□□□ 0.3
PCNX4-213ENST00000556907 ZNF185O15231 689 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 TIMM44O43615 452 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 CLDN11O75508 207 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 KAT7O95251 611 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 CISD3P0C7P0 127 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 CHRNB1P11230 501 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 TARSP26639 723 aaKnown RBP16.9■□□□□ 0.3
PCNX4-213ENST00000556907 NUBP1P53384 320 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 CDH4P55283 916 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 COPS2P61201 443 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 SLC12A1Q13621 1099 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 CCINQ13939 588 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 VSIG1Q86XK7 387 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 NAT16Q8N8M0 369 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 TERB1Q8NA31 727 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 WFIKKN2Q8TEU8 576 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 PRICKLE1Q96MT3 831 aaPredicted RBP16.9■□□□□ 0.3
PCNX4-213ENST00000556907 ZWILCHQ9H900 591 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 ANLNQ9NQW6 1124 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 PLK2Q9NYY3 685 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 VANGL2Q9ULK5 521 aa16.9■□□□□ 0.3
PCNX4-213ENST00000556907 NYNRINQ9P2P1 1898 aaKnown RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 COL4A3Q01955 1670 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 TBC1D3BA6NDS4 549 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 E9PAM4 449 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 LUC7L3O95232 432 aaKnown RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 RARAP10276 462 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 CD72P21854 359 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 SLC6A11P48066 632 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 RPS24P62847 133 aaKnown RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 ZNF211Q13398 564 aaPredicted RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 CDH18Q13634 790 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 EIF4HQ15056 248 aaKnown RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 PPP2R5EQ16537 467 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 SMTNL2Q2TAL5 461 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 HSF5Q4G112 596 aaPredicted RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 CWF19L1Q69YN2 538 aaKnown RBP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 FSTL4Q6MZW2 842 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 C12orf40Q86WS4 652 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 MFN1Q8IWA4 741 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 ZNF683Q8IZ20 524 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 CCDC185Q8N715 623 aa16.89■□□□□ 0.29
PCNX4-213ENST00000556907 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.89■□□□□ 0.29
PCNX4-213ENST00000556907 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms