RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SMOC1Q9H4F8 434 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ACP6Q9NPH0 428 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 SAMSN1Q9NSI8 373 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ASNSD1Q9NWL6 643 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 SUSD2Q9UGT4 822 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF638Q14966 1978 aaKnown RBP7.59□□□□□ -1.2
SCFD1-222ENST00000556768 NCOR2Q9Y618 2525 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SYNJ2BP-COX16A0A087WUM0 186 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 LNP1A1A4G5 178 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 C4orf47A7E2U8 309 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 BECN2A8MW95 431 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 FZD6O60353 706 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 F9P00740 461 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 DNTTP04053 509 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ASLP04424 464 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 FYNP06241 537 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SYPP08247 313 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 UCHL3P15374 230 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 IRX4P78413 519 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 APBA1Q02410 837 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ZBTB16Q05516 673 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 NME3Q13232 169 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ENPP2Q13822 863 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 FAM133BQ5BKY9 247 aaKnown RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ZC3H12AQ5D1E8 599 aaKnown RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 MS4A13Q5J8X5 152 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ACBD5Q5T8D3 534 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 TTC39BQ5VTQ0 682 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SYPL2Q5VXT5 272 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 TCEAL6Q6IPX3 200 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 CHSY1Q86X52 802 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ERICH1Q86X53 443 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 HDDC3Q8N4P3 179 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 FRMD1Q8N878 549 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 CADM4Q8NFZ8 388 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SORCS1Q8WY21 1168 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 TCEAL3Q969E4 200 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 C18orf8Q96DM3 657 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 DMRTB1Q96MA1 342 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 HSPA12BQ96MM6 686 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SPAG5Q96R06 1193 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 CPXM1Q96SM3 734 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 STK33Q9BYT3 514 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 MKRN2Q9H000 416 aaKnown RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 VPS16Q9H269 839 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 COX16Q9P0S2 106 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 EVLQ9UI08 416 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-222ENST00000556768 HCN2Q9UL51 889 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 CLEC4EQ9ULY5 219 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 STAP1Q9ULZ2 295 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 SLC6A14Q9UN76 642 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 NCKAP1Q9Y2A7 1128 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 DAAM1Q9Y4D1 1078 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 PATJQ8NI35 1801 aa7.58□□□□□ -1.2
SCFD1-222ENST00000556768 PTPRDP23468 1912 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 IGHV1OR15-9A0A0B4J2B8 117 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 GOLGA6L7A0A1B0GV03 622 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 MEI4A8MW99 385 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 LSM8O95777 96 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SERPINF2P08697 491 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 CYP11B1P15538 503 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 ITPKAP23677 461 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 NOS2P35228 1153 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 EIF1AXP47813 144 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TPMTP51580 245 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RNASE9P60153 205 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RPS24P62847 133 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC6A3Q01959 620 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SULT2A1Q06520 285 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC12A1Q13621 1099 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SYCP1Q15431 976 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 STX1AQ16623 288 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 UAP1L1Q3KQV9 507 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TTC31Q49AM3 519 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 MIIPQ5JXC2 388 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TAC4Q86UU9 113 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 ADIPOR2Q86V24 386 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 ZNF677Q86XU0 584 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 LGI2Q8N0V4 545 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 DEFB106AQ8N104 65 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 CFAP52Q8N1V2 620 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 DEFB119Q8N690 84 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 OR2T3Q8NH03 318 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 GANCQ8TET4 914 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 CYB5D2Q8WUJ1 264 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TOE1Q96GM8 510 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 ZNF419Q96HQ0 510 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 FCRL2Q96LA5 508 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 LSM14BQ9BX40 385 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC32A1Q9H598 525 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 WDCPQ9H6R7 721 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms