RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 COLGALT2Q8IYK4 626 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 THEM5Q8N1Q8 247 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 NUP205Q92621 2012 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 HDAC11Q96DB2 347 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ERP27Q96DN0 273 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 EPAS1Q99814 870 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 MANSC1Q9H8J5 431 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 RRN3Q9NYV6 651 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 DCTN4Q9UJW0 460 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 NYNRINQ9P2P1 1898 aaKnown RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 C2orf71A6NGG8 1288 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ALDH1A2O94788 518 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ALDH1A1P00352 501 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 SKIP12755 728 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 PGAM1P18669 254 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 TYMPP19971 482 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 OR1G1P47890 313 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 SARNPP82979 210 aaKnown RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 NOMO2Q5JPE7 1267 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 KCTD11Q693B1 232 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 GLB1LQ6UWU2 654 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 PACS1Q6VY07 963 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 MARK2Q7KZI7 788 aaKnown RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 CHSY1Q86X52 802 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 SCML4Q8N228 414 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ARMC2Q8NEN0 867 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ZSCAN18Q8TBC5 510 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 DPF3Q92784 378 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 GBA3Q9H227 469 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 VPS11Q9H270 941 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ZNF395Q9H8N7 513 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 TBC1D13Q9NVG8 400 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ARHGEF38Q9NXL2 777 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 PLLPQ9Y342 182 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 BRCA2P51587 3418 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 A0A1W2PQ45 241 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-211ENST00000556648 A0A1W2PQY0 241 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 E2F8A0AVK6 867 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 DFFAO00273 331 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 PAGE1O75459 146 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 SOAT2O75908 522 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 AP2A1O95782 977 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 MOCS2O96007 188 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-211ENST00000556648 JCHAINP01591 159 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 GRK4P32298 578 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 ABCG1P45844 678 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 DDR2Q16832 855 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 TCTN1Q2MV58 587 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 CERCAMQ5T4B2 595 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 BTBD8Q5XKL5 378 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 OTOP3Q7RTS5 596 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 C14orf80Q86SX3 495 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 ARHGAP12Q8IWW6 846 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 NDUFAF2Q8N183 169 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 GPR152Q8TDT2 470 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 ZNF669Q96BR6 464 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-211ENST00000556648 PRR11Q96HE9 360 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-211ENST00000556648 TSSK1BQ9BXA7 367 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 ZCWPW1Q9H0M4 648 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 KLC4Q9NSK0 619 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 NDFIP2Q9NV92 336 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 USH1CQ9Y6N9 552 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 MYLKQ15746 1914 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 PLXNA3P51805 1871 aa10.37□□□□□ -0.75
TMEM260-211ENST00000556648 CCDC78A2IDD5 438 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 TPP1O14773 563 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 KIF3CO14782 793 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 CABYRO75952 493 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 KRT38O76015 456 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 ALDOAP04075 364 aaKnown RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 TPH1P17752 444 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 USP46P62068 366 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 IRX4P78413 519 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 C16orf46Q6P387 395 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 SLC24A5Q71RS6 500 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 PDZD4Q76G19 769 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 NLRP9Q7RTR0 991 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 CNTD1Q8N815 330 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 AZIN2Q96A70 460 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 HHIPL1Q96JK4 782 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 GLT1D1Q96MS3 346 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 FERMT1Q9BQL6 677 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 PLCD4Q9BRC7 762 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 IQCGQ9H095 443 aaKnown RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 OSBPL2Q9H1P3 480 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 SMOC2Q9H3U7 446 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 CASS4Q9NQ75 786 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 MKS1Q9NXB0 559 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 EMCNQ9ULC0 261 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 RAD54BQ9Y620 910 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 A8MUI8 341 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 TRPA1O75762 1119 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 INHAP05111 366 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 NEFHP12036 1026 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 TARSP26639 723 aaKnown RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 SERPINB9P50453 376 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms