RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 POLR3BQ9NW08 1133 aaPredicted RBP22.7■■□□□ 1.22
NDUFB1-205ENST00000556555 PPARGC1AQ9UBK2 798 aaKnown RBP22.7■■□□□ 1.22
NDUFB1-205ENST00000556555 TBC1D30Q9Y2I9 924 aa22.7■■□□□ 1.22
NDUFB1-205ENST00000556555 A0A1W2PQF6 199 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 TCRBV21S2A2A0A5A6 115 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 AKR1B15C9JRZ8 316 aaPredicted RBP22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 E9PAM4 449 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 TBX2Q13207 712 aaPredicted RBP22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 BYSLQ13895 437 aaKnown RBP22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 SLC18A3Q16572 532 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 USP39Q53GS9 565 aaKnown RBP22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 FSCBQ5H9T9 825 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 PITRM1Q5JRX3 1037 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 SLFN11Q7Z7L1 901 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 C14orf80Q86SX3 495 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 SETD3Q86TU7 594 aaPredicted RBP22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 MDGA1Q8NFP4 955 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 PHOX2BQ99453 314 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 DEF6Q9H4E7 631 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 FBRSQ9HAH7 460 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 OR12D3Q9UGF7 316 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 RAB23Q9ULC3 237 aa22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 ZFHX2Q9C0A1 2572 aaPredicted RBP22.69■■□□□ 1.22
NDUFB1-205ENST00000556555 PRR23AA6NEV1 266 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 AP5Z1O43299 807 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 ATMINO43313 823 aaPredicted RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 SYNCRIPO60506 623 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 RPP40O75818 363 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 SRPRAP08240 638 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 PSMA2P25787 234 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 GGCXP38435 758 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 EIF4A3P38919 411 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 CSKP41240 450 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 IL12RB1P42701 662 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 PXNP49023 591 aaPredicted RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 ST8SIA6P61647 398 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 ACAP1Q15027 740 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 FNDC3BQ53EP0 1204 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 CCDC122Q5T0U0 273 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 C6orf118Q5T5N4 469 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 CXorf57Q6NSI4 855 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 GAS2L3Q86XJ1 694 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 ZYG11BQ9C0D3 744 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 TMEM245Q9H330 911 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 CD248Q9HCU0 757 aa22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 BCCIPQ9P287 314 aaKnown RBP eCLIP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 INTS6Q9UL03 887 aaKnown RBP22.68■■□□□ 1.22
NDUFB1-205ENST00000556555 EIF3CLB5ME19 914 aaKnown RBP22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 HRO43593 1189 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 RNF8O76064 485 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 WASP42768 502 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 SIM2Q14190 667 aaPredicted RBP22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 PTPRNQ16849 979 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 EFHC2Q5JST6 749 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 ZNF783Q6ZMS7 281 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 CIR1Q86X95 450 aaPredicted RBP22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 SUMF1Q8NBK3 374 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 HMGB4Q8WW32 186 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 SORCS1Q8WY21 1168 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 EIF3CQ99613 913 aaKnown RBP22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 NENFQ9UMX5 172 aa22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 SMG5Q9UPR3 1016 aaKnown RBP22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 RIF1Q5UIP0 2472 aaKnown RBP22.67■■□□□ 1.22
NDUFB1-205ENST00000556555 AKR1B10O60218 316 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 SRGAP2O75044 1071 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 EPHX1P07099 455 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 MRE11P49959 708 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 VASPP50552 380 aaPredicted RBP22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 ZNF75DP51815 510 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 ADKP55263 362 aaKnown RBP22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 ECT2LQ008S8 904 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 OGDHQ02218 1023 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 ASTE1Q2TB18 679 aaPredicted RBP22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 RAB6CQ53S08 254 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 MANEALQ5VSG8 457 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 RNF219Q5W0B1 726 aaPredicted RBP22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 SCYL2Q6P3W7 929 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 CEP68Q76N32 757 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 CCDC185Q8N715 623 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 CYB5D2Q8WUJ1 264 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 SPACA7Q96KW9 195 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 CCDC42Q96M95 316 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 RAB6CQ9H0N0 254 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 THAP2Q9H0W7 228 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 TMPRSS4Q9NRS4 437 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 MYO1AQ9UBC5 1043 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 SUN2Q9UH99 717 aa22.66■■□□□ 1.22
NDUFB1-205ENST00000556555 WASH3PC4AMC7 463 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 GFRA3O60609 400 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 ZNF217O75362 1048 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 CYP1A2P05177 515 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 RHOCP08134 193 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 GABRG2P18507 467 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 L1CAMP32004 1257 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 HTR7P34969 479 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 NNMTP40261 264 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 IRAK1P51617 712 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 ALFQ53S48 1182 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 KIAA1211LQ6NV74 962 aa22.65■■□□□ 1.22
NDUFB1-205ENST00000556555 PSTKQ8IV42 348 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms