RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 RABEP1Q15276 862 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 MIDNQ504T8 468 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 LRIG3Q6UXM1 1119 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 SYT13Q7L8C5 426 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 SUGP1Q8IWZ8 645 aaKnown RBP5.1□□□□□ -1.59
SCFD1-221ENST00000556534 ADGRF4Q8IZF3 695 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 OR6Y1Q8NGX8 325 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 CCT6BQ92526 530 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 LMTK3Q96Q04 1460 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PIGSQ96S52 555 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 TAF1DQ9H5J8 278 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-221ENST00000556534 IL21RQ9HBE5 538 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PDE11AQ9HCR9 933 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 SAYSD1Q9NPB0 183 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 SLC22A11Q9NSA0 550 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 TMLHEQ9NVH6 421 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 ELOVL5Q9NYP7 299 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 HEY2Q9UBP5 337 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 AGO2Q9UKV8 859 aaKnown RBP5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PKP3Q9Y446 797 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 AFG3L2Q9Y4W6 797 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-221ENST00000556534 MORC2Q9Y6X9 1032 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF335Q9H4Z2 1342 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-221ENST00000556534 E7EVH7 732 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 UGDHO60701 494 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 PRPH2P23942 346 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 PCP4P48539 62 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 MTX1Q13505 466 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 CUL4BQ13620 913 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 PXDC1Q5TGL8 231 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 ASPHD1Q5U4P2 390 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.09□□□□□ -1.591e-9■□□□□ 8.8
SCFD1-221ENST00000556534 DDIASQ8IXT1 998 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 ENDOVQ8N8Q3 282 aaKnown RBP5.09□□□□□ -1.59
SCFD1-221ENST00000556534 NRACQ8N912 160 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 SPATA5Q8NB90 893 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 CSGALNACT1Q8TDX6 532 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 RUBCNQ92622 972 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 KAT2AQ92830 837 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 RILPL2Q969X0 211 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 ARRDC3Q96B67 414 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 ZFYVE19Q96K21 471 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 ADAD1Q96M93 576 aaKnown RBP5.09□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF48Q96MX3 618 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-221ENST00000556534 TMEM79Q9BSE2 394 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 PAGR1Q9BTK6 254 aa5.09□□□□□ -1.59
SCFD1-221ENST00000556534 IPO11Q9UI26 975 aaKnown RBP5.09□□□□□ -1.59
SCFD1-221ENST00000556534 KIR2DS5A0A0G2JLQ3 304 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 CXorf65A6NEN9 183 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 NPIPB13A6NJU9 1138 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 NPIPB5A8MRT5 1133 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 KCNJ18B7U540 433 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 NPIPB4C9JG80 1138 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 KIR2DS3K7RE56 304 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 HNRNPRO43390 633 aaKnown RBP5.08□□□□□ -1.6
SCFD1-221ENST00000556534 TFRCP02786 760 aaKnown RBP5.08□□□□□ -1.6
SCFD1-221ENST00000556534 TK1P04183 234 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 LYL1P12980 280 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 ACP5P13686 325 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 HALP42357 657 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 MCM2P49736 904 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 CDK18Q07002 472 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 LRRC24Q50LG9 513 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 ARL13AQ5H913 290 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-221ENST00000556534 TTLL5Q6EMB2 1281 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 SYNE3Q6ZMZ3 975 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 RASGRP2Q7LDG7 609 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 MOGAT3Q86VF5 341 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 PTGR2Q8N8N7 351 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-221ENST00000556534 SPPL3Q8TCT6 385 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 IP6K1Q92551 441 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 KTI12Q96EK9 354 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-221ENST00000556534 HERPUD2Q9BSE4 406 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 ISCA1Q9BUE6 129 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 TUBB6Q9BUF5 446 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 HERC2P3Q9BVR0 1158 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 HDHD5Q9BXW7 423 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 FRMD8Q9BZ67 464 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-221ENST00000556534 PPCSQ9HAB8 311 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 THSD1Q9NS62 852 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 MSRB1Q9NZV6 116 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 FEM1BQ9UK73 627 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 UTS2RQ9UKP6 389 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 FBXO4Q9UKT5 387 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 SLC8A2Q9UPR5 921 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 DTX4Q9Y2E6 619 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 PCDHGB3Q9Y5G1 929 aa5.08□□□□□ -1.6
SCFD1-221ENST00000556534 B9A039 149 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 SOCS2O14508 198 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 KRT38O76015 456 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 CSF1P09603 554 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 DHRS4L1P0CG22 281 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 CHN1P15882 459 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 PTGER1P34995 402 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 RHAGQ02094 409 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 ZBTB16Q05516 673 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 SEMA3AQ14563 771 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 TAF5Q15542 800 aa5.07□□□□□ -1.6
SCFD1-221ENST00000556534 ISM2Q6H9L7 571 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms