RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PLB1Q6P1J6 1458 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PRG4Q92954 1404 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 MROH7Q68CQ1 1323 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 MYBBP1AQ9BQG0 1328 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 GSTTP1A0A1W2PQM5 241 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ARHGEF35A5YM69 484 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 C2orf74A8MZ97 194 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 F5H423 210 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 TRIM77I1YAP6 450 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 K7ERQ8 282 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 DNM1LO00429 736 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TNFRSF10CO14798 259 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 DYNC1LI2O43237 492 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 KLF4O43474 513 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 KCNQ2O43526 872 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PLA2G6O60733 806 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 SRGAP2O75044 1071 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ADAM23O75077 832 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 LRIG2O94898 1065 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TJP3O95049 919 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ZNF202O95125 648 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 KCNH1O95259 989 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 APOC1P02654 83 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CALB1P05937 261 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 SRGAP2BP0DMP2 458 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PRPS2P11908 318 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 AKR1B1P15121 316 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 RAG1P15918 1043 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 HLA-DPA1P20036 260 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CCNA2P20248 432 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 NUP62P37198 522 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 IARSP41252 1262 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 STAT5AP42229 794 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TXKP42681 527 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PRCPP42785 496 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CEBPAP49715 358 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 CDK7P50613 346 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CASP7P55210 303 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 NLRP11P59045 1033 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 RPL26P61254 145 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 ERVK-21P61565 698 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CCZ1BP86790 482 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CCZ1P86791 482 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 OCRLQ01968 901 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 RESTQ13127 1097 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 NAB1Q13506 487 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 RCN2Q14257 317 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ITIH4Q14624 930 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 RRS1Q15050 365 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 SMU1Q2TAY7 513 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 HSP90AA4PQ58FG1 418 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 FSCBQ5H9T9 825 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TEX30Q5JUR7 227 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 EFHC1Q5JVL4 640 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 DGKKQ5KSL6 1271 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PRAMEF13Q5VWM6 474 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 RWDD4Q6NW29 188 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 DHRS4L2Q6PKH6 230 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 BLOC1S2Q6QNY1 142 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 LRIG3Q6UXM1 1119 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 NSMFQ6X4W1 530 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TRIM72Q6ZMU5 477 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ANKS3Q6ZW76 656 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 USP43Q70EL4 1123 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 MARK2Q7KZI7 788 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 GSTA5Q7RTV2 222 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CPLX4Q7Z7G2 160 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PRUNE1Q86TP1 453 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 FJX1Q86VR8 437 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 MAPKAPK5Q8IW41 473 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 DCP1BQ8IZD4 617 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 C11orf65Q8NCR3 313 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ICA1LQ8NDH6 482 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 MCOLN3Q8TDD5 553 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TGFBRAP1Q8WUH2 860 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PTERQ96BW5 349 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 HES6Q96HZ4 224 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 TCEANC2Q96MN5 208 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 ZNF578Q96N58 590 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 PRAM1Q96QH2 718 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 LMF1Q96S06 567 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 WRNIP1Q96S55 665 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 SEC62Q99442 399 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 MYD88Q99836 296 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 FAM83CQ9BQN1 747 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 NEURL2Q9BR09 285 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 CDK19Q9BWU1 502 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 STK33Q9BYT3 514 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 WDR12Q9GZL7 423 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 CLPBQ9H078 707 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 QRSL1Q9H0R6 528 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 SLC6A17Q9H1V8 727 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 EPS8L2Q9H6S3 715 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 C1GALT1Q9NS00 363 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 STOML1Q9UBI4 398 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 UXTQ9UBK9 157 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 IPO11Q9UI26 975 aaKnown RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 LNPEPQ9UIQ6 1025 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms