RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 RHOCP08134 193 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 GLULP15104 373 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 ERCC2P18074 760 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 AMPD1P23109 780 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 CTNNA2P26232 953 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 CD70P32970 193 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 HTR7P34969 479 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF135P52742 658 aaPredicted RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 RWDD2BP57060 319 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 PRKCQQ04759 706 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 MESP2Q0VG99 397 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 C6orf118Q5T5N4 469 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 ASTLQ6HA08 431 aaPredicted RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 KATNAL2Q8IYT4 538 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 EDAQ92838 391 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 EXOC4Q96A65 974 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 MSANTD3Q96H12 275 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 SHDQ96IW2 340 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 MUC3BQ9H195 1237 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 MFSD1Q9H3U5 465 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 FBRSL1Q9HCM7 1045 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 MAN2B1O00754 1011 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 SLC34A2O95436 690 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 APODP05090 189 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 HLA-FP30511 346 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 HOXC13P31276 330 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ARSEP51690 589 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 GNG11P61952 73 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 SIGLEC14Q08ET2 396 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 GRSF1Q12849 480 aaKnown RBP eCLIP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 LMAN2Q12907 356 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 UBXN2BQ14CS0 331 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RPS6KA1Q15418 735 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ARTNQ5T4W7 220 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 NLRP14Q86W24 1093 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF354CQ86Y25 554 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 SLC35F6Q8N357 371 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RTL3Q8N8U3 475 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF557Q8N988 423 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 FIBINQ8TAL6 211 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ALG3Q92685 438 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 PSMB7Q99436 277 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF670Q9BS34 389 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 MAK16Q9BXY0 300 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 SLC2A11Q9BYW1 496 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 NDFIP2Q9NV92 336 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 TMEM248Q9NWD8 314 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 KIAA1522Q9P206 1035 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 GGA2Q9UJY4 613 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ZKSCAN5Q9Y2L8 839 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ENC1O14682 589 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 KAT7O95251 611 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 PABPC1P11940 636 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ALADP13716 330 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 IL4RP24394 825 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 MSNP26038 577 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 EIF2DP41214 584 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 CSKP41240 450 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 HCAR3P49019 387 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF211Q13398 564 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 DPYSQ14117 519 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 PREPLQ4J6C6 727 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ANKRD20A8PQ5CZ79 823 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 MEI1Q5TIA1 1274 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RNF219Q5W0B1 726 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 KAZNQ674X7 775 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 CXorf57Q6NSI4 855 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 TMCO3Q6UWJ1 677 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 MFSD7Q6UXD7 560 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 ANKS1BQ7Z6G8 1248 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RFX6Q8HWS3 928 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 SFTPA1Q8IWL2 248 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RCOR2Q8IZ40 523 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 NETO2Q8NC67 525 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 FLCNQ8NFG4 579 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 OR52K2Q8NGK3 314 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 TSC1Q92574 1164 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 HES6Q96HZ4 224 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 CELF6Q96J87 481 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 SPON2Q9BUD6 331 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 CIPCQ9C0C6 399 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 RCOR3Q9P2K3 495 aaPredicted RBP14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 VPS28Q9UK41 221 aa14.43□□□□□ -0.1
VIPAS39-208ENST00000556412 C3orf70A6NLC5 250 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 DDX3YO15523 660 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 RAMP2O60895 175 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 CISD3P0C7P0 127 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 MZF1P28698 734 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 GRIA2P42262 883 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 MAPKAPK2P49137 400 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 PEX5P50542 639 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 SEC13P55735 322 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 DYNLT1P63172 113 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 GEN1Q17RS7 908 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 C1orf228Q6PIY5 440 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 SPOCD1Q6ZMY3 1216 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 NUDT18Q6ZVK8 323 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 SETD3Q86TU7 594 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms