RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PFDN1O60925 122 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 DNAJC6O75061 913 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 KRT36O76013 467 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 AP2B1P63010 937 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 SOX4Q06945 474 aaPredicted RBP15.19■□□□□ 0.02
NEK9-209ENST00000556170 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 NBPF20Q3BBV1 942 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 TAF2Q6P1X5 1199 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 PACS1Q6VY07 963 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 SCUBE1Q8IWY4 988 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 ZNF567Q8N184 647 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 RMDN1Q96DB5 314 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 PCED1BQ96HM7 432 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 ARHGEF38Q9NXL2 777 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 TEX264Q9Y6I9 313 aa15.19■□□□□ 0.02
NEK9-209ENST00000556170 GOLGA4Q13439 2230 aaKnown RBP15.19■□□□□ 0.02
NEK9-209ENST00000556170 AXLP30530 894 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 TUBP50607 506 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 DLG2Q15700 870 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 VWA5B1Q5TIE3 1220 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 TRNP1Q6NT89 227 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 OMDQ99983 421 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 DCLRE1BQ9H816 532 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 USP29Q9HBJ7 922 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 NT5MQ9NPB1 228 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 PNPOQ9NVS9 261 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 MPP6Q9NZW5 540 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 DNAJC25-GNG10A0A024R161 153 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 SCAMP3O14828 347 aaKnown RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 COPAP53621 1224 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 CRYBB1P53674 252 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 SLC10A2Q12908 348 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 CTBP1Q13363 440 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 C10orf120Q5SQS8 335 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 KLC3Q6P597 504 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 OTOP3Q7RTS5 596 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 C10orf107Q8IVU9 208 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 MYLPFQ96A32 169 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 SMARCD1Q96GM5 515 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 RNPEPL1Q9HAU8 725 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 PIGVQ9NUD9 493 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 PRR5-ARHGAP8B1AHC4 643 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 ABLIM1O14639 778 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 FAM189A1O60320 539 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 HNRNPCL1O60812 293 aaKnown RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 BEST1O76090 585 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 FBXO21O94952 628 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 UBTFL6P0CB48 400 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 AKR1A1P14550 325 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 ARHGAP8P85298 464 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 INCA1Q0VD86 236 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 SNX30Q5VWJ9 437 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 ISLR2Q6UXK2 745 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 PTAR1Q7Z6K3 402 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 PSTKQ8IV42 348 aaKnown RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 SPATA22Q8NHS9 363 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 RPRD1AQ96P16 312 aaPredicted RBP15.18■□□□□ 0.02
NEK9-209ENST00000556170 VCX3BQ9H321 246 aa15.18■□□□□ 0.02
NEK9-209ENST00000556170 TP73O15350 636 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 TYROBPO43914 113 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 NAGLUP54802 743 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 NSUN2Q08J23 767 aaKnown RBP eCLIP15.17■□□□□ 0.02
NEK9-209ENST00000556170 KCNJ11Q14654 390 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 FAM187BQ17R55 369 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 TCHHL1Q5QJ38 904 aaPredicted RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 STRADAQ7RTN6 431 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 OSTM1Q86WC4 334 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 PIWIL2Q8TC59 973 aaKnown RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 STK32AQ8WU08 396 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 NRP1O14786 923 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 PROCP04070 461 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 MAXP61244 160 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 YWHAHQ04917 246 aaPredicted RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 CAND1Q86VP6 1230 aaKnown RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 BLOC1S5Q8TDH9 187 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 COLEC11Q9BWP8 271 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 DENND2DQ9H6A0 471 aaPredicted RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 DLGAP2Q9P1A6 1054 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 MTSS1O43312 755 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 PTPN9P43378 593 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 SERPINB8P50452 374 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 NUDT2P50583 147 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 CSHL1Q14406 222 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 ZNF235Q14590 738 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 KIF19Q2TAC6 998 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 SH2D4BQ5SQS7 431 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 FAM117BQ6P1L5 589 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 SPATA24Q86W54 205 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 CCNJLQ8IV13 435 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 PIP4K2CQ8TBX8 421 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 C10orf82Q8WW14 230 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 AGAP2Q99490 1192 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 COL1A2P08123 1366 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms