RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 CFAP69A5D8W1 941 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 HACD1B0YJ81 288 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 NEDD8-MDP1E9PL57 170 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 H7C0C1 242 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 DFFAO00273 331 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 SCAMP3O14828 347 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 TSPAN3O60637 253 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 PHF2O75151 1096 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 LUC7L3O95232 432 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 KLKB1P03952 638 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 ADH5P11766 374 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 SP100P23497 879 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 ATP5OP48047 213 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 FNTAP49354 379 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 NDST2P52849 883 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 GEMIN4P57678 1058 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 YBEYP58557 167 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 GAD2Q05329 585 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 PAFAH1B3Q15102 231 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 E2F5Q15329 346 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 NCBP2-AS2Q69YL0 99 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 HEATR6Q6AI08 1181 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 NADSYN1Q6IA69 706 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 C1orf228Q6PIY5 440 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 TPGS1Q6ZTW0 290 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 CREG2Q8IUH2 290 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 MFSD6LQ8IWD5 586 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 CCDC105Q8IYK2 499 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 BBS5Q8N3I7 341 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 PCDH19Q8TAB3 1148 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 CCDC26Q8TAB7 109 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 CCHCR1Q8TD31 782 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 ADAMTS19Q8TE59 1207 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 PRICKLE1Q96MT3 831 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 PRMT1Q99873 361 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 KXD1Q9BQD3 176 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 TRMT61BQ9BVS5 477 aaKnown RBP11.51□□□□□ -0.57
SHMT2-220ENST00000555634 AP1M1Q9BXS5 423 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 SP110Q9HB58 689 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 SPHK2Q9NRA0 654 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 IGSF9Q9P2J2 1179 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 THEGQ9P2T0 379 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 SNX10Q9Y5X0 201 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 WNT6Q9Y6F9 365 aa11.51□□□□□ -0.57
SHMT2-220ENST00000555634 GOLGA6L7A0A1B0GV03 622 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 WASH4PA8MWX3 477 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 FAM72CH0Y354 149 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 NDC80O14777 642 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 MFSD11O43934 449 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 AMPD1P23109 780 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 SLC6A4P31645 630 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 VIPR2P41587 438 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 KLF1Q13351 362 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 XRCC4Q13426 336 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 SLC12A1Q13621 1099 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 BYSLQ13895 437 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 POLD3Q15054 466 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 NOMO1Q15155 1222 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 LLGL1Q15334 1064 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 SMAD2Q15796 467 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 CCNG2Q16589 344 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 C5orf22Q49AR2 442 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 FAM72AQ5TYM5 149 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 FAM72DQ6L9T8 149 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 AADACL2Q6P093 401 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 MAATS1Q7Z4T9 603 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 FAM72BQ86X60 149 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 CFAP52Q8N1V2 620 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 CCDC89Q8N998 374 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 CCNYQ8ND76 341 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 TFB1MQ8WVM0 346 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 RSAD2Q8WXG1 361 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 IRF7Q92985 503 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 BHMTQ93088 406 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 MAGOHBQ96A72 148 aaKnown RBP11.5□□□□□ -0.57
SHMT2-220ENST00000555634 LRRC45Q96CN5 670 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 SLC2A11Q9BYW1 496 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 MAGEH1Q9H213 219 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 BRD9Q9H8M2 597 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 ANLNQ9NQW6 1124 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 MPP6Q9NZW5 540 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 CDH22Q9UJ99 828 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 ZNF148Q9UQR1 794 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
SHMT2-220ENST00000555634 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 NUP205Q92621 2012 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 MYOFQ9NZM1 2061 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ZSCAN5CA6NGD5 496 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 DRGXA6NNA5 263 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms