RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 IPCEF1Q8WWN9 437 aaPredicted RBP3.47□□□□□ -1.85
SRP54-207ENST00000555535 CATSPERBQ9H7T0 1116 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 TBC1D14Q9P2M4 693 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 A0A1B0GU03 582 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 M0QZQ0 153 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 SCGB1D2O95969 90 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 HRGP04196 525 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 SLC1A5Q15758 541 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 ZNF772Q68DY9 489 aaPredicted RBP3.46□□□□□ -1.86
SRP54-207ENST00000555535 DARS2Q6PI48 645 aaKnown RBP3.46□□□□□ -1.86
SRP54-207ENST00000555535 ZNF474Q6S9Z5 364 aaPredicted RBP3.46□□□□□ -1.86
SRP54-207ENST00000555535 RNF44Q7L0R7 432 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 SDR16C5Q8N3Y7 309 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 MAGEB6Q8N7X4 407 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 FAM216AQ8WUB2 273 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 UHRF2Q96PU4 802 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 SPAG4Q9NPE6 437 aa3.46□□□□□ -1.86
SRP54-207ENST00000555535 WDR81Q562E7 1941 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 ZBED1O96006 694 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 ANXA2P07355 339 aaKnown RBP3.45□□□□□ -1.86
SRP54-207ENST00000555535 RFPL3SP0C7P2 107 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 U2AF1L5P0DN76 240 aaPredicted RBP3.45□□□□□ -1.86
SRP54-207ENST00000555535 ALADP13716 330 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 ZP1P60852 638 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 U2AF1Q01081 240 aaKnown RBP eCLIP3.45□□□□□ -1.86
SRP54-207ENST00000555535 GALEQ14376 348 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 GRM3Q14832 879 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 NFE2Q16621 373 aaPredicted RBP3.45□□□□□ -1.86
SRP54-207ENST00000555535 ANXA2RQ3ZCQ2 193 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.45□□□□□ -1.86
SRP54-207ENST00000555535 NXNQ6DKJ4 435 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 ACSM6Q6P461 480 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 CRTC1Q6UUV9 634 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 DHRS13Q6UX07 377 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 SLC16A12Q6ZSM3 486 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 KRT28Q7Z3Y7 464 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 EXOC3L1Q86VI1 746 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 LAS2Q8IYD9 372 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 TCEAL8Q8IYN2 117 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 ASB12Q8WXK4 309 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 ANKRD9Q96BM1 317 aaPredicted RBP3.45□□□□□ -1.86
SRP54-207ENST00000555535 STRBPQ96SI9 672 aaKnown RBP3.45□□□□□ -1.86
SRP54-207ENST00000555535 PKP4Q99569 1192 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 RXFP3Q9NSD7 469 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 DONSONQ9NYP3 566 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 SLC8A2Q9UPR5 921 aa3.45□□□□□ -1.86
SRP54-207ENST00000555535 MGEA5O60502 916 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 IGBP1P78318 339 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 GPS1Q13098 491 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 SEMA3BQ13214 749 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 SEMA5AQ13591 1074 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 PLCB4Q15147 1175 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 CYB5RLQ6IPT4 315 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 HMBOX1Q6NT76 420 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 RHBDF2Q6PJF5 856 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 CLASRPQ8N2M8 674 aaKnown RBP3.44□□□□□ -1.86
SRP54-207ENST00000555535 OR52L2PQ8NGH6 319 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 ABHD5Q8WTS1 349 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 ADAMTS14Q8WXS8 1223 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 GFRA4Q9GZZ7 299 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 ZBTB26Q9HCK0 441 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 HEYLQ9NQ87 328 aaPredicted RBP3.44□□□□□ -1.86
SRP54-207ENST00000555535 PCDHGB6Q9Y5F9 930 aa3.44□□□□□ -1.86
SRP54-207ENST00000555535 IGKV6D-41A0A0C4DH26 115 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 VWA5AO00534 786 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 FAM193AP78312 1265 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 FSCBQ5H9T9 825 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 ODR4Q5SWX8 454 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 DCAF12L2Q5VW00 463 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 CCDC144NLQ6NUI1 221 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 KIAA0408Q6ZU52 694 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 PIK3AP1Q6ZUJ8 805 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 GPSM1Q86YR5 675 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 TCP11L2Q8N4U5 519 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 GLMPQ8WWB7 406 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 OVCA2Q8WZ82 227 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 GPR78Q96P69 363 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 APOL5Q9BWW9 433 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 B3GNT3Q9Y2A9 372 aa3.43□□□□□ -1.86
SRP54-207ENST00000555535 CCNT2O60583 730 aaKnown RBP3.42□□□□□ -1.86
SRP54-207ENST00000555535 LMX1BO60663 402 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 KAT7O95251 611 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 MMP8P22894 467 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 MST1P26927 711 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 SLC8A1P32418 973 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 TUBA1BP68363 451 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 ILF3Q12906 894 aaKnown RBP eCLIP3.42□□□□□ -1.866e-8■□□□□ 8.9
SRP54-207ENST00000555535 STPG1Q5TH74 334 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 KLHDC7AQ5VTJ3 777 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 C16orf89Q6UX73 402 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 CCDC28AQ8IWP9 274 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 FAM217AQ8IXS0 508 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 PMM1Q92871 262 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 PHKBQ93100 1093 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 LRRC46Q96FV0 321 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 ZNF347Q96SE7 839 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 UNKQ9C0B0 810 aaKnown RBP3.42□□□□□ -1.86
SRP54-207ENST00000555535 IL21RQ9HBE5 538 aa3.42□□□□□ -1.86
SRP54-207ENST00000555535 GAB2Q9UQC2 676 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms