RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 IER5LQ5T953 404 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 NUGGCQ68CJ6 796 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 TFAP2DQ7Z6R9 452 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 RPGRIP1Q96KN7 1286 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 EPAS1Q99814 870 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 TRIM51Q9BSJ1 452 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 KLC2Q9H0B6 622 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 NOL6Q9H6R4 1146 aaKnown RBP11.09□□□□□ -0.63
TDP1-211ENST00000555178 SH3BP1Q9Y3L3 701 aa11.09□□□□□ -0.63
TDP1-211ENST00000555178 ZFP37Q9Y6Q3 630 aaPredicted RBP11.09□□□□□ -0.63
TDP1-211ENST00000555178 COL4A2P08572 1712 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 TTI1O43156 1089 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 DAPK3O43293 454 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 LIASO43766 372 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 SLC2A3P11169 496 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 CYP1B1Q16678 543 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 ADGRF1Q5T601 910 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 CCDC137Q6PK04 289 aaKnown RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 ZC3H18Q86VM9 953 aaKnown RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 UNC45BQ8IWX7 931 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 MMGT1Q8N4V1 131 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 GLIS1Q8NBF1 620 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 CELF6Q96J87 481 aaKnown RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 ANKZF1Q9H8Y5 726 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 GDE1Q9NZC3 331 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 STIM2Q9P246 746 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 DMGDHQ9UI17 866 aaKnown RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 STOML2Q9UJZ1 356 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 EFR3BQ9Y2G0 817 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 UQCRHLA0A096LP55 91 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 APOC4-APOC2K7ER74 178 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 APOC2P02655 101 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 ASGR2P07307 311 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 UQCRHP07919 91 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 COILP38432 576 aaPredicted RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 GDF10P55107 478 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 TRADDQ15628 312 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 FSCBQ5H9T9 825 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 C8orf74Q6P047 294 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 ARHGAP36Q6ZRI8 547 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 FAM217AQ8IXS0 508 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 ADGRG2Q8IZP9 1017 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 CELF5Q8N6W0 485 aaKnown RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 C12orf50Q8NA57 414 aaPredicted RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 CHFRQ96EP1 664 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 PNKPQ96T60 521 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 TMEM121Q9BTD3 319 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 LRRC19Q9H756 370 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 TRPV4Q9HBA0 871 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 DTLQ9NZJ0 730 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 RCOR3Q9P2K3 495 aaPredicted RBP11.08□□□□□ -0.64
TDP1-211ENST00000555178 NUMBLQ9Y6R0 609 aa11.08□□□□□ -0.64
TDP1-211ENST00000555178 IGLV3-10A0A075B6K4 115 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 E2F8A0AVK6 867 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 ESYT3A0FGR9 886 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 CCDC188H7C350 402 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 CTIFO43310 598 aaKnown RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 PFKLP17858 780 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 KPNA1P52294 538 aaPredicted RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 TFDP2Q14188 446 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 NOMO1Q15155 1222 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 TRIP13Q15645 432 aaPredicted RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 GAB4Q2WGN9 574 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 NLRP14Q86W24 1093 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 VSIG1Q86XK7 387 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 SFTPA1Q8IWL2 248 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 SLC35B2Q8TB61 432 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 DEPDC1BQ8WUY9 529 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 UBXN4Q92575 508 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 P3H4Q92791 437 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 TBC1D31Q96DN5 1066 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 C1orf74Q96LT6 269 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 CCDC114Q96M63 670 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 RPRD1AQ96P16 312 aaPredicted RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 EBF3Q9H4W6 596 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 HPS4Q9NQG7 708 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 LIMD1Q9UGP4 676 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 DRGXA6NNA5 263 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 ZNF487B1APH4 448 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 ETS1P14921 441 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 HOXC13P31276 330 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 PTGIRP43119 386 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 SLC11A2P49281 568 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 EIF3EP60228 445 aaKnown RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 HTR4Q13639 388 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 BYSLQ13895 437 aaKnown RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 OASLQ15646 514 aaKnown RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 SMAD2Q15796 467 aaKnown RBP11.07□□□□□ -0.64
TDP1-211ENST00000555178 CCNG2Q16589 344 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 EML3Q32P44 896 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 LEXMQ3ZCV2 418 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 C12orf40Q86WS4 652 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 CCDC105Q8IYK2 499 aa11.07□□□□□ -0.64
TDP1-211ENST00000555178 TDRD5Q8NAT2 981 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms