RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 IRAK1P51617 712 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 PMS2P54278 862 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 ZNF844Q08AG5 666 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 ODF2Q5BJF6 829 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 ANO7Q6IWH7 933 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 DNAJC24Q6P3W2 148 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 LRRC31Q6UY01 552 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 RAB44Q7Z6P3 723 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-216ENST00000554975 CMTM8Q8IZV2 173 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 STKLD1Q8NE28 680 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 ADAM32Q8TC27 787 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 ARL8AQ96BM9 186 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 SNF8Q96H20 258 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 SENP8Q96LD8 212 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 C11orf70Q9BRQ4 267 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 FRMD8P1Q9BZ68 369 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-216ENST00000554975 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 SLC32A1Q9H598 525 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 MBD1Q9UIS9 605 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-216ENST00000554975 PCDHGC3Q9UN70 934 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 C2CD2Q9Y426 696 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 ASB3Q9Y575 518 aa11.54□□□□□ -0.56
SHMT2-216ENST00000554975 TENM4Q6N022 2769 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 AGTP01019 485 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PAEPP09466 180 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PYGMP11217 842 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ODC1P11926 461 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 RARGP13631 454 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 DESP17661 470 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ITIH2P19823 946 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 MMP8P22894 467 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 RRM1P23921 792 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ATICP31939 592 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PTGER3P43115 390 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 TAF6P49848 677 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 GSCP56915 257 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-216ENST00000554975 LILRA4P59901 499 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PPP2R2AP63151 447 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 BYSLQ13895 437 aaKnown RBP11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PIGHQ14442 188 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-216ENST00000554975 UAP1Q16222 522 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-216ENST00000554975 TAOK1Q7L7X3 1001 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 SRLQ86TD4 932 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 CCDC50Q8IVM0 306 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 MAB21L3Q8N8X9 362 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 MDGA1Q8NFP4 955 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 TSTD1Q8NFU3 115 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 OR2I1PQ8NGU4 316 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 GIPC2Q8TF65 315 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 RLN3Q8WXF3 142 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 C18orf8Q96DM3 657 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PGM2Q96G03 612 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ROPN1BQ9BZX4 212 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-216ENST00000554975 NEUROG2Q9H2A3 272 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ROPN1Q9HAT0 212 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-216ENST00000554975 CYP3A43Q9HB55 503 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ASIC3Q9UHC3 531 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 GGA2Q9UJY4 613 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 ATP8A1Q9Y2Q0 1164 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 NFS1Q9Y697 457 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 PTPRJQ12913 1337 aa11.53□□□□□ -0.56
SHMT2-216ENST00000554975 KALRNO60229 2985 aa11.52□□□□□ -0.56
SHMT2-216ENST00000554975 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 OR6C75A6NL08 312 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 NDUFAB1O14561 156 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 FGF19O95750 216 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 KRT19P08727 400 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 PLTPP55058 493 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 WNT7BP56706 349 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 FBXO43Q4G163 708 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 USP39Q53GS9 565 aaKnown RBP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF667Q5HYK9 610 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 C6orf118Q5T5N4 469 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 LMBRD2Q68DH5 695 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 TXNDC8Q6A555 127 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 OVOS1Q6IE37 1185 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 POLNQ7Z5Q5 900 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 METTL23Q86XA0 190 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 TMEFF1Q8IYR6 380 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 NIPA2Q8N8Q9 360 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 MDM1Q8TC05 714 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 BCAS4Q8TDM0 211 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 FNIP1Q8TF40 1166 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 ART4Q93070 314 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 ACDQ96AP0 544 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 CRELD1Q96HD1 420 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 FAM84AQ96KN4 292 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF560Q96MR9 790 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 CAMK1GQ96NX5 476 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 SEPT5Q99719 369 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 NUSAP1Q9BXS6 441 aaKnown RBP11.52□□□□□ -0.57
SHMT2-216ENST00000554975 TRIM31Q9BZY9 425 aa11.52□□□□□ -0.57
SHMT2-216ENST00000554975 MTMR12Q9C0I1 747 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms