RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 TRIM64BA6NI03 449 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 RSL1D1O76021 490 aaKnown RBP16.02■□□□□ 0.15
SYNE3-203ENST00000554873 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.15
SYNE3-203ENST00000554873 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.15
SYNE3-203ENST00000554873 NRF1Q16656 503 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.15
SYNE3-203ENST00000554873 MGAT5BQ3V5L5 792 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 CCDC60Q8IWA6 550 aaPredicted RBP16.02■□□□□ 0.15
SYNE3-203ENST00000554873 WNK4Q96J92 1243 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 FAM96AQ9H5X1 160 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 MKS1Q9NXB0 559 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 PGAP2Q9UHJ9 254 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 DNAJC16Q9Y2G8 782 aa16.02■□□□□ 0.15
SYNE3-203ENST00000554873 SNAP91O60641 907 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 NR3C2P08235 984 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 TBXAS1P24557 533 aaPredicted RBP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 GDF10P55107 478 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 IGBP1P78318 339 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 NSUN2Q08J23 767 aaKnown RBP eCLIP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 MTM1Q13496 603 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PPP2R5DQ14738 602 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 DNAJC24Q6P3W2 148 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 TTC30AQ86WT1 665 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 MMAAQ8IVH4 418 aaKnown RBP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PDIK1LQ8N165 341 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 CPT1BQ92523 772 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 FRMD8Q9BZ67 464 aaPredicted RBP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 SEPT3Q9UH03 358 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PTBP2Q9UKA9 531 aaKnown RBP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 TCRBV9S1A1TA0A576 114 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 ZMPSTE24O75844 475 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 MCF2P10911 925 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 KCNA2P16389 499 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PTPN7P35236 360 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PRKCEQ02156 737 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 MTERF2Q49AM1 385 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 TIGD2Q4W5G0 525 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PPP1R2P3Q6NXS1 205 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 TAB3Q8N5C8 712 aaPredicted RBP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 ATP6V0D2Q8N8Y2 350 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 TMEM143Q96AN5 459 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 ZNF778Q96MU6 729 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 DHX33Q9H6R0 707 aaKnown RBP16.01■□□□□ 0.15
SYNE3-203ENST00000554873 POU2F3Q9UKI9 436 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 PACSIN3Q9UKS6 424 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 ZNRF3Q9ULT6 936 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 RIPK3Q9Y572 518 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 CPQQ9Y646 472 aa16.01■□□□□ 0.15
SYNE3-203ENST00000554873 DYTNA2CJ06 578 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 KRT37O76014 449 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 KRT75O95678 551 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 CHEK2O96017 543 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 CST3P01034 146 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 PSAPP07602 524 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 SNRPAP09012 282 aaKnown RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 P4HA1P13674 534 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 ZNF132P52740 706 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 DYNLT1P63172 113 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 ZCCHC23Q6ZST2 131 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 SLC26A11Q86WA9 606 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 DNAJC28Q9NX36 388 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 H0YCG3 227 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 RGS20O76081 388 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 CALB1P05937 261 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 WEE2P0C1S8 567 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 MZF1P28698 734 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 IDH3AP50213 366 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 GALNT2Q10471 571 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 IKBKEQ14164 716 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 C16orf46Q6P387 395 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 IGFN1Q86VF2 1251 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 ZNF354CQ86Y25 554 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 BHLHE22Q8NFJ8 381 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 ACTL9Q8TC94 416 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 CALML6Q8TD86 181 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 LPAR1Q92633 364 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 GPRASP2Q96D09 838 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 CGRRF1Q99675 332 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 C1orf50Q9BV19 199 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 TARS2Q9BW92 718 aaKnown RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 SLC13A1Q9BZW2 595 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 ZFYVE28Q9HCC9 887 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 TCRBV7S3A2A0A539 114 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 KLHL41O60662 606 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 FARP2O94887 1054 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 ALOX5P09917 674 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 PTPN1P18031 435 aaKnown RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 XRCC1P18887 633 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 NCF2P19878 526 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 CCND2P30279 289 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 PIGHQ14442 188 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 AGAP7PQ5VUJ5 663 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 GPR107Q5VW38 600 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms