RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SNX1Q13596 522 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 GAS6Q14393 721 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 OASLQ15646 514 aaKnown RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 DBN1Q16643 649 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 HADHQ16836 314 aaKnown RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 DCAF4L1Q3SXM0 396 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 HHATQ5VTY9 493 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 LMBRD2Q68DH5 695 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 DNAJC24Q6P3W2 148 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 CEP68Q76N32 757 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 CHSY1Q86X52 802 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 VSIG1Q86XK7 387 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 BRSK2Q8IWQ3 736 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 PPIL6Q8IXY8 311 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ARHGAP24Q8N264 748 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 FITM2Q8N6M3 262 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 UBR7Q8N806 425 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 GPATCH11Q8N954 259 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ANKRD42Q8N9B4 389 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 RBBP8NLQ8NC74 664 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 SMG8Q8ND04 991 aaKnown RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 MIEF2Q96C03 454 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 LOXL4Q96JB6 756 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 BTBD6Q96KE9 485 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 APOL6Q9BWW8 343 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 PLA2G2FQ9BZM2 168 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ARRDC1-AS1Q9H2J1 176 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 MMADHCQ9H3L0 296 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 LRRC4CQ9HCJ2 640 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 SAYSD1Q9NPB0 183 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 SNTG2Q9NY99 539 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 POLIQ9UNA4 740 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ZNF148Q9UQR1 794 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 KIF26AQ9ULI4 1882 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 CACNA1EQ15878 2313 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 SCN1AP35498 2009 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 E7ESA3 106 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 F8W810 466 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 K7ESF4 209 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 AXIN1O15169 862 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 XYLBO75191 536 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 EPN2O95208 641 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 ANP32DO95626 131 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 KRT1P04264 644 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 POU2F2P09086 479 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 RPL17P18621 184 aaKnown RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 SPINK2P20155 84 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 AKAP5P24588 427 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 GCKP35557 465 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 GRM5P41594 1212 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 ARSEP51690 589 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 ZNF252P-AS1Q0IIN9 211 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 TMED2Q15363 201 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 ZKSCAN8Q15776 578 aaPredicted RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 TAZQ16635 292 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 HIF1AQ16665 826 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 SLC10A6Q3KNW5 377 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 USP41Q3LFD5 358 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 PPM1LQ5SGD2 360 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 RNASEH2BQ5TBB1 312 aaKnown RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 TDRD10Q5VZ19 366 aaKnown RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 SCARA3Q6AZY7 606 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 FUT10Q6P4F1 479 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 SPOCD1Q6ZMY3 1216 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 SPEM1Q8N4L4 309 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 ENDOVQ8N8Q3 282 aaKnown RBP11.47□□□□□ -0.57
SRP54-205ENST00000554803 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 ZNF516Q92618 1163 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 B3GALT6Q96L58 329 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 DHRS4Q9BTZ2 278 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 GPR62Q9BZJ7 368 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 LHX5Q9H2C1 402 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 PHTF1Q9UMS5 762 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 AGAP1Q9UPQ3 857 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 IPPQ9Y573 584 aa11.47□□□□□ -0.57
SRP54-205ENST00000554803 hCG_1818297A0A087WSY0 165 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 IQANK1A0A1B0GTG1 560 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 LACTBL1A8MY62 500 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 KLF11O14901 512 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 GIPC1O14908 333 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 CCL16O15467 120 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 TYROBPO43914 113 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 DNAJC6O75061 913 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 ASS1P00966 412 aaKnown RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 C8AP07357 584 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 CHRNB1P11230 501 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 NOVA1P51513 510 aaKnown RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 LRRC14Q15048 493 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 TBCCQ15814 346 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 CCDC6Q16204 474 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 SGSM1Q2NKQ1 1148 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 TSNAXIP1Q2TAA8 658 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms