RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 H0Y626 953 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 PES1O00541 588 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ZNF500O60304 480 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ACSL4O60488 711 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 TBL1XO60907 577 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 TRIM16O95361 564 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 DLDP09622 509 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ACADMP11310 421 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 FECHP22830 423 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 CSNK1EP49674 416 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 RPS24P62847 133 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 RING1Q06587 406 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 HNRNPDQ14103 355 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 HLA-BQ31612 363 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 KCNT1Q5JUK3 1230 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 RRAGAQ7L523 313 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 GLRX5Q86SX6 157 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 AHI1Q8N157 1196 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 TC2NQ8N9U0 490 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 DQX1Q8TE96 717 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ADAMTS14Q8WXS8 1223 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 SNX19Q92543 992 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 MRGPRX3Q96LB0 322 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 TTYH3Q9C0H2 523 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 PCED1AQ9H1Q7 454 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 SERGEFQ9UGK8 458 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 XPO7Q9UIA9 1087 aaKnown RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 BTBD3Q9Y2F9 522 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ADAMTS20P59510 1910 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ACACAQ13085 2346 aa10.97□□□□□ -0.65
SHMT2-215ENST00000554656 ATRXP46100 2492 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 GOLGA4Q13439 2230 aaKnown RBP10.96□□□□□ -0.65
SHMT2-215ENST00000554656 P4HA2O15460 535 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 MFAP3LO75121 409 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 SEMA4FO95754 770 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 AFPP02771 609 aaKnown RBP10.96□□□□□ -0.65
SHMT2-215ENST00000554656 GYPCP04921 128 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 ZNF883P0CG24 379 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 MATKP42679 507 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 RPL34P49207 117 aaKnown RBP10.96□□□□□ -0.65
SHMT2-215ENST00000554656 TBX4P57082 545 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-215ENST00000554656 CCZ1BP86790 482 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 CCZ1P86791 482 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-215ENST00000554656 ARID5AQ03989 594 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 E2F5Q15329 346 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 SYCP1Q15431 976 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 FSCBQ5H9T9 825 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 MPP7Q5T2T1 576 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 NUGGCQ68CJ6 796 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 MMS22LQ6ZRQ5 1243 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 TAC4Q86UU9 113 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 KIAA1524Q8TCG1 905 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 TTC17Q96AE7 1141 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 BIRC7Q96CA5 298 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 SLC39A13Q96H72 371 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 MIS12Q9H081 205 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 TM9SF3Q9HD45 589 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 TM7SF3Q9NS93 570 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 KCND1Q9NSA2 647 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 STIM2Q9P246 746 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 CYTH4Q9UIA0 394 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 CAPN11Q9UMQ6 739 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 SIK3Q9Y2K2 1263 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 SNX11Q9Y5W9 270 aa10.96□□□□□ -0.65
SHMT2-215ENST00000554656 CELSR3Q9NYQ7 3312 aa10.96□□□□□ -0.66
SHMT2-215ENST00000554656 BAHCC1Q9P281 2608 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 C10orf142B7Z368 130 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 ARHGAP6O43182 974 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 DKK1O94907 266 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 CER1O95813 267 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 IGHV4-34P06331 123 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 SKILP12757 684 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 CASP14P31944 242 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 CSKP41240 450 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 GPD2P43304 727 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 SLC11A2P49281 568 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 ZBED6P86452 979 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 SCAPQ12770 1279 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 KIF19Q2TAC6 998 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 SYPL2Q5VXT5 272 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 DENND1BQ6P3S1 775 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 CCNI2Q6ZMN8 369 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 DBX2Q6ZNG2 339 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 MARCH9Q86YJ5 346 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 MFN1Q8IWA4 741 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 UNC45BQ8IWX7 931 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 HJURPQ8NCD3 748 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 ZNF397Q8NF99 534 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 FIBINQ8TAL6 211 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms