RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 XYLT1Q86Y38 959 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SLC41A1Q8IVJ1 513 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 DHX40Q8IX18 779 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 RGL4Q8IZJ4 473 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 CCAR2Q8N163 923 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 KNL1Q8NG31 2342 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 NEK11Q8NG66 645 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 DNASE2BQ8WZ79 361 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 NT5C3BQ969T7 300 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 MYEOVQ96EZ4 313 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 PCMTD1Q96MG8 357 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 HSPA12BQ96MM6 686 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SPAG5Q96R06 1193 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 NPY6RQ99463 290 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 PCED1AQ9H1Q7 454 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 WDCPQ9H6R7 721 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 CBX8Q9HC52 389 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 CD93Q9NPY3 652 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 PRSS16Q9NQE7 514 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 FAM207AQ9NSI2 230 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 COX16Q9P0S2 106 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 XPO7Q9UIA9 1087 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 INTS6Q9UL03 887 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SCML1Q9UN30 329 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 ERVW-1Q9UQF0 538 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SIK3Q9Y2K2 1263 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 LAMA1P25391 3075 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 PCDH15Q96QU1 1955 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 EDDM13A0A1B0GTR0 161 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 LGALS16A8MUM7 142 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 METTL12A8MUP2 240 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CDX4O14627 284 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 RNASEH1O60930 286 aaKnown RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 PAGE1O75459 146 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 GFPT2O94808 682 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 DNTTP04053 509 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CYP1A1P04798 512 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 SYPP08247 313 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 MMEP08473 750 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ADRB1P08588 477 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ZNF18P17022 549 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ENGP17813 658 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CXCR3P49682 368 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 KLK7P49862 253 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 SULT1E1P49888 294 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 VASPP50552 380 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 PLK1P53350 603 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 RPS14P62263 151 aaKnown RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 NOMO3P69849 1222 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ECT2LQ008S8 904 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CDR2Q01850 454 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 UBXN1Q04323 297 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 GFPT1Q06210 699 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 AUHQ13825 339 aaKnown RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 NCAPHQ15003 741 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 SYCP1Q15431 976 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 HNRNPA1L2Q32P51 320 aaKnown RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 PLEKHG6Q3KR16 790 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 TTC31Q49AM3 519 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 C5orf22Q49AR2 442 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 FAM102AQ5T9C2 384 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 RNF219Q5W0B1 726 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 ZNF776Q68DI1 518 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 FBXL22Q6P050 247 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 TRIM72Q6ZMU5 477 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ZNF366Q8N895 744 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CPA5Q8WXQ8 436 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 MYO19Q96H55 970 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 MRGPRX3Q96LB0 322 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 C1orf74Q96LT6 269 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 RPRD1AQ96P16 312 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 ERGIC2Q96RQ1 377 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 GPR174Q9BXC1 333 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 RSPH9Q9H1X1 276 aaPredicted RBP9□□□□□ -0.97
ACTN1-213ENST00000554508 SGK2Q9HBY8 427 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CAPN10Q9HC96 672 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 NLRC4Q9NPP4 1024 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ARHGEF38Q9NXL2 777 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 NCKAP1Q9Y2A7 1128 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 ITIH6Q6UXX5 1313 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 CABIN1Q9Y6J0 2220 aa9□□□□□ -0.97
ACTN1-213ENST00000554508 NCOR2Q9Y618 2525 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-213ENST00000554508 MEI4A8MW99 385 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 CLDN11O75508 207 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 KCNK5O95279 499 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 CFIP05156 583 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 CCDC172P0C7W6 258 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 CHRNB2P17787 502 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 CSRP1P21291 193 aaKnown RBP8.99□□□□□ -0.97
ACTN1-213ENST00000554508 ATXN3P54252 364 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-213ENST00000554508 CDH4P55283 916 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 FMO1Q01740 532 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 DEUP1Q05D60 604 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 ZNF177Q13360 481 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-213ENST00000554508 IQCB1Q15051 598 aa8.99□□□□□ -0.97
ACTN1-213ENST00000554508 DCAF12L1Q5VU92 463 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms